Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPAPQRKHRRGGFSHRCFPTPQTAMTPQPAGPPDGGWGWVVAAAAFAINGLSYGLLRSLGLAFPDLAEHFDRSAQDTAWISALALAVQQAASPVGSALSTRWGARPVVMVGGVLASLGFVFSAFASDLLHLYLGLGLLAGFGWALVFAPALGTLSRYFSRRRVLA-VGLALTGNGASSLLLAPALQLLLDTFGWRGALLLLGAITLHLTPCGALLLPLVLPGDPPAPPRSPLAALGLSLFTRRAFSIFALGTALVGGGYFVPYVHLAPHALDRGLGGYGAALVVAVAAMGDAGARLVCGWLADQGWVPLPRLLAVFGALTGLGLWVVGLVPVVGGEESWGGPLLAAAVAYGLSAGSYA-PLVFGVLPGLVGVGGVVQATGLVMMLMSLGGLLGPPLSGFLRDETGD-FTASFLLSGSLILSGSFIYIGLPRALP------SCGPASPPATPPPETGELLPAPQAVLLSPGGPGSTLDTTC------------------ |
| 3WDO Chain:A ((1-453)) | ---------------------DYKMTP-GERRATWGLGTVFSLRMLGMF-MVLPVLTTYGMALQG-----ASEALIGIAIGIYGLTQAVFQIPFG-LLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKL------GLHALFWMIAILATTGIALTIWVVPNSSTHVLNRE-------SGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLAD--AGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLI-VVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALKVRLLETEGVKEVLIAEEEHSAYVKIDSKVTNRFEVEQAIRQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -329355 for 3616 contacts (-91.1/contact) +
2D Compatibility (PS) -42856 + (NN) 2781 + (LL) 1908
1D Compatibility (HY) -24000 + (ID) 4200
Total energy: -395722.0 ( -109.44 by residue)
QMean score : 0.187
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