Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQNKLKLCSKANVYTEVPDGGWGWAVAVSF-FFVEVFTYGIIKTFGVFFNDLMDSFNESNSRISWIISICVFVLTFSAPLATVLSNRFGHRLVVMLGGLLVSTGMVAASFSQEVSHMYVAIGIISGLGYCFSFLPTVTILSQYFGKRRSIVTAVASTGECFAVFAFAPAIMALKERIGWRYSLLFVGLLQLNIVIFGALLRPIFIRGPASPKIVIQENRKEAQYMLENEKTRTSIDSIDSGVELTTSPKNVPTHTNLELEPKADMQQVLVKTSPRPSEKKAPLLDFSILKEKSFICYALFGLFATLGFFAPSLYIIPLGISLGIDQDRAAFLLSTMAIAEVFGRIGAGFVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMSCSIFFGFMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYIFIQSIAGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKMGLCQHHHSGETKVVSHRGKTLQDIPEDFLEMDLAKNEHRVHVQMEPV--------------- |
3WDO Chain:A ((1-453)) | ----------DYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYG------MALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLG-------------------LHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMV----------------------------KGSFSKVL--AEPRLLKLNFGIMCLHMLLMSTFV--ALPGQLADAGFP---------------AAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVV-AEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG--YKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALKVRLLE-TEGVKEVLIAEEEHSAYVKIDSKVTNRFEVEQAIRQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -329762 for 3757 contacts (-87.8/contact) +
2D Compatibility (PS) -44330 + (NN) 5003 + (LL) 6108
1D Compatibility (HY) -19200 + (ID) 3850
Total energy: -386031.0 ( -102.75 by residue)
QMean score : 0.254
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