Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MELKKS-PDGGWG------WVIVFVSFLTQFLCYGSPLAVGVLYIEWLDAFGEG--KGKTAWVGSLASGVGLLASPVCSLCVSS-FGARPVTIFSGFMVAGGLMLSSFAPNIYFLFFSYGIVVGLGCGLLYTATVTITCQYF---DDRRGLALGLISTGSSVGLFIYAALQRMLVEFYGLDGCLLI--VGALALNILACGSLMRPLQSSDCPLPKKIAPEDLPDKYSIYNEKGKNLEENINILDKSYSSEEKCRITLA-----NGDWKQDSLLHKNPTVTHTKEPETYK-KKVAEQTYFCKQLAKRKWQLYKNYCGETVALFKNKVF--SALFIAILLFDIGGFPPSLLMEDVARSSNVKEEEFIMPLISIIGIMTAVGKLLLGILADFKWINTLYLYVATLIIMGLALCAIPFAKSYVTLALLSGILGFLTGNWSIFPYVTTKTVGIEKLAHAYGILMFFAGLGNSLGPPIVGWFYDWTQTYDIAFYFSGFCVLLGGFILLLAALPSWDTCNKQLPKPAPTTFLYKVASNV |
| 4IKW Chain:A ((3-494)) | SIDKQQIAASVPQRGFFGHPKGLFTLFFTEFWERFSYYGMRAILVYYMYYEVSKGGLGLDEHLALAIMSIYGALVYMSGIIGGWLADRVFGTSRAVFYGGLLIMAGHIALAIPGGVAALFVSMALIV-LGTGLLKPNVSSIVGDMYKPGDDRRDAGFSIFYMGINLGAFLAPLVVGTAGMKYNFHLGFGLAAVGMFLGLVVFVATRKKNLGLAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTVETFISLVGILGIIIPIIYFVVMYRSPKTTAEERSRVIAYIPLFVASAMFWAIQEQGSTILANYADKRTQLDVAGIHLSPAWFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELCLSPVGLSATTKL--------------APAAFSAQTMSLWFLSNAAAQAINAQLVRF------------YTPENETAYFGTIGGAALVLGLILLAIAPRIGRLMKG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -365268 for 3851 contacts (-94.9/contact) +
2D Compatibility (PS) -47068 + (NN) -7904 + (LL) 1600
1D Compatibility (HY) -23200 + (ID) 3750
Total energy: -445590.0 ( -115.71 by residue)
QMean score : 0.266
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