Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MLSYGERLGSPAVSPLPVRGGHVMRGTAFAYVPSPQ----------VLHRIP--GTSAYAFPSLGPVALAEHTCPCGEVLERHEPLPAKLALEEEQKPESRL---VPKLRQAGAMLLKVPL--MLTFLYLFVCS-LDMLSS-----AFQLAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTSTSIIVSMVSSGLLEVS-SAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWL----SVLVLLPLEAATGYLHHITRLVVASFNIHGGRDAPDLL--KIITEPFTKLI-------IQLDESVITSIATGD-----------ESLRNHSLIQIWCHPDSLQAPTSMS------RAEANSSQTLGNATMEKC------------NHIFVDTGLPDLAVGLILLAGSLVLLCTCLI----LLVKMLNSLLKGQVAKVIQKVINTDFPAPFTWVTGYFAMVVGASMTFVVQSSSVFTSAITPLIGLGVISIERAYPLTLGSNI-GTTTTAILAALASPREKLSSAFQIALCHF---FFNISGILLWYPVPCTR--LPIRMAKALGKRTAKYRWFAVL-------------------YLLVCFLLLPSLVFGISMAGWQVMVG-----VGTPFGALLAFVVLINVLQSRSPGHLPKWLQTWDFLPRWMHSL-KPLDHLI-------TRATLCCARPEP------RSPPLPPRVFLEELPPATPSPRLALPAHHNATRL----------------------------- |
| 5AGA Chain:A ((3-827)) | DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLG-QVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADSNAVQIVGMSATL------PNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQASECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASMGAIEACVMWLLENE------FIQSTEEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLS-QFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSARKEAVEERRNMRTIWVTGRKGLTEREAAALIVEEARMILQQDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -385292 for 4639 contacts (-83.1/contact) +
2D Compatibility (PS) -63636 + (NN) -4957 + (LL) 680
1D Compatibility (HY) -33200 + (ID) 5550
Total energy: -491955.0 ( -106.05 by residue)
QMean score : 0.200
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