Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVITPLLLLLFLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYIKDWLERKKPPFGAISSSVLLMIIYTTFCDTFSNPNIDLDKFSLVLILFIIFSIQLSFMLLTFIFSTRNNSGFTPADTVAIIFCSTHKSLTLGIPMLKIVFAGHEHLSLISVPLLIYHPAQILLGSVLVPTIKSWMVSRQKKLLQTRGPLANLNNPEGLEYLSIKFGH |
3ZUY Chain:A ((2-309)) | NILSKISSFIGKTFSLWAALFAAAAFFAPDTF---KWAGPYIP---WLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWLLSKLLNL---PAEIAVGVILVGCCPGGTASNVMTYLA-RGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWT-------GLPYDAQKTLTIEVGMQNSGLAAALAAAHFAAA---PVVAVPGALFSVWHNISGSLLATYWAAKA-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -336511 for 2853 contacts (-117.9/contact) +
2D Compatibility (PS) -31524 + (NN) -7088 + (LL) 2560
1D Compatibility (HY) -17200 + (ID) 3050
Total energy: -392813.0 ( -137.68 by residue)
QMean score : 0.355
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