Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNPAIQAAIDLTAGAAGGTACV--LTGQPFDTMKVKMQTFPD-----------LYRGLTDCCLKTYSQVGFRGFYKGTSPALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAKLSDLQNAAAGSFASAFAALVLCPTELVKCRLQTMYEMETSGKIAKSQNTVWSVIKSILRKDGPLGFYHGLSSTLLREVPGYFFFFGGYELSR-SFFASGRSKDELGPVPLMLSGGVG-GICLWLAVYPVDCIKSRIQVLSMSGKQAGFIRTFINVVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSRKLMMNQLEAY |
| 2LCK Chain:A ((20-299)) | -----------------AGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTK--GSEHAGIGSRL---LAGSTTGALAVAVAQPTDVVKVRFQAQAR---AGGGRRYQSTV-EAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDL---PCHFTSAFGAGFCTTVIASPVDVVKTRY-MNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -50339 for 1459 contacts (-34.5/contact) +
2D Compatibility (PS) -26521 + (NN) 5440 + (LL) 2292
1D Compatibility (HY) -10000 + (ID) 3950
Total energy: -83078.0 ( -56.94 by residue)
QMean score : 0.069
|
|
|