Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHSEGAPGDPAGTVVPQELLEEMLWFFRVEDASPWNHSILALAAVVVIISMVLLGRSIQASRKEKMQPPEKETPEVLHLDEAKDHNSLNNLRETLLSEKPNLAQVELEL-KERDVLSVFLPDVPETES
3KSU Chain:A ((37-86))
----------------------------------------------------------------------------VLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLF--DFAEKEF
General information:
TITO was launched using:
RESULT:
Template:
3KSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4909 for 258 contacts (-19.0/contact) +
2D Compatibility (PS) -4776 + (NN) 1967 + (LL) 5860
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -5908.0 ( -22.90 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_3KSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KSU-query.scw
PDB file :
Tito_Scwrl_3KSU.pdb
: