Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDYDEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCRVPDAANLSSAWRNNSVPLRLRDGREVPHSCSRYRLATIANFSALGLEPGRDVDLGQLEQESCLDGWEFSQDVYLSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVSGQLSDRFGRKN------VLFATMAVQTGFSFLQIFSISWE------------MFTVLFVIVGMG-----QISNYVVAFILGTEILGKSVRIIFSTLGVCTFFAVGYMLLPLFAYFIR-----------DWRMLLLALTVPGVLCVPLWWFIPESPRWLISQRRFREAEDIIQKAAKMNNIAVPAVIFDSVEELNPLKQQKAFILDLFRTRNIAIMTIMSLLLWMLTSVGYFALSLDAPNLHGD-------AYLNCFLSALIEIPAYITAWLLLRTLPRR--YIIAAVLFWGGGVLLFIQLVPVDYYFLSIGLV-MLGKFGITSAFSM-----LYVFTAELYPTLVRNMAVGVTSTASRVGSIIAPYFV------------YLGAYNRMLPYIVMGSLTVLIGILT-LFFPESLGMTLPETLEQMQKVKWFRSGKKTRDSMETEENPKVLITAF |
| 4GBY Chain:A ((66-479)) | ------------------------------------------------------------------------------------------------------------------------------------------------------IGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVS--FNQFAII----FGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKI--MGNTLATQAVQEIKHSLDHGRKTGGRLL-MFGVGVIVIGVMLSIFQQF---VGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGAL-----GMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQW----LANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEE-LEAL----WE----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -311524 for 2823 contacts (-110.4/contact) +
2D Compatibility (PS) -35415 + (NN) -7022 + (LL) 12760
1D Compatibility (HY) -37200 + (ID) 5000
Total energy: -383401.0 ( -135.81 by residue)
QMean score : 0.205
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