Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSSVFLIATPEHRCRVPDAANLSSAWRNHTVPLRLRDGREVPHSCRRYRLATIANFSALGLEPGRDVDLGQLEQESCLDGWEFSQDVYLSTIVTEWNLVCEDDWKAPLTISLFFVGVLLGSFISGQLSDRFGRK------NVLFVTMGMQTGFSFLQIFSKNFEMFVVLFVLVGM--GQISNYVAAFVLGTEILGKSVRIIFSTL-------GVCIFYAFGYMVLPLFAYFIRDWRMLLVALTMPGVLCVALWWFIPESPRW-LISQGRFEEAEVIIRKAAKANGIVVPSTIFDPSELQDLSSK--KQQSHNILDLLRTWNIRMVTIMSIMLWMTI------SVGYFGLSL-DTPNLHGDIFVNCFLSAMVEVPAYVLAWLLLQYLPRR--YSMATALFLGGSVLLFMQLVPPDLYYLATVLVMVGKFGVTAAFS-----MVYVYTAELYPTVVRNMGVGVSSTASRLGS-ILSPYFVYLGAYDRFLPYILMGSLTILTAILTLF-LPESFGTPLPDTIDQMLRVKGMKHRKTPSHTRMLKDGQERPTILKSTAF |
| 4PYP Chain:A ((51-455)) | ---------------------------------------------------------------------------------------------------------------------RYGESILPTTLTTLWSL----------SVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKL---GKSFEMLILGRFIIGVYCGLTTGFVPMYV--GEVSPTALRGALGTLHQLGIVVGILIAQVFG---LDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVT-----HDLQEMKEESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIG-SGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPET--------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -243924 for 2766 contacts (-88.2/contact) +
2D Compatibility (PS) -37710 + (NN) -9244 + (LL) 11556
1D Compatibility (HY) -32000 + (ID) 4850
Total energy: -316172.0 ( -114.31 by residue)
QMean score : 0.213
|
|
|