Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHCRPPADANLSKNGGLEVWLPRDRQGQPESCLRFTSPQWGLPFLNGTEANGTGATEPCTDGWIYDNSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKVLILNYLQTAVSGTCAAFAP----------NFPIYCA--------FRLLSGMALAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYAVPH-----------WRHLQLLVSAPFFAFFIYSWFFIESARWHSSSGRLDLTLRALQRVA--RINGKREEGAKLSMEVLRASLQKELTMGKGQASAMELLRCPTLRHLFLCLSMLWFATSFAYYGLVMDLQGFGVSIYLIQ-VIFGAVDLPAKLVGFLVINSLGRRPAQ-MAALLLA-GICILLNGVIPQDQSIVRTSLAVLGKGCLAASFNCI-FLYTGELYPTMIRQTGMGMGSTMARVG----SIVSPLVS----MTAELYPSMPLFIYGAVPV-AASAVTVLLPETLGQPLPDTVQDLESRWAPTQKEAGIYPRKGKQTRQQQEHQKYMVPLQASAQEKNGL |
| 4GC0 Chain:A ((65-479)) | ---------------------------------------------------------------------------------------------------------------------------------------------LIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVML---SIFQQFVGINVVLY-----YAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK----TLEELEALWE--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264193 for 3144 contacts (-84.0/contact) +
2D Compatibility (PS) -38460 + (NN) -12422 + (LL) 10740
1D Compatibility (HY) -28800 + (ID) 4500
Total energy: -337635.0 ( -107.39 by residue)
QMean score : 0.297
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