Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFEELLEQVGGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSSCLRFAYPQALPNTTLGEERQSRGELEDEPATVPCSQGWEYDHSEFSSTIATESQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVG----YLIRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLLHCARLNGRPVCEDSFSQEAVSKVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSLDVSGLGL---NVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAF---GTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLA--PLAALLDGVWLSLP------KLTYGGIALLAAGTAL-LLPETRQAQLPETIQDVERKSAPTSLQEEEMPMKQVQN |
| 4QIQ Chain:A ((7-470)) | --------------SYIFSITLVATLGGLLFGYDTAV---ISGTVESLNTVFVAPQNLS----------ESAANSLLGFCVASALIGCIIGGALGGYCSNRFG-----------------------------------RRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVP---VYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELA----PAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMT--LATQAVQEIKHSL---------DRLLMFGVGVIVIGVMLSIFQQFV--------------------GINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211058 for 3406 contacts (-62.0/contact) +
2D Compatibility (PS) -43055 + (NN) -5389 + (LL) 9704
1D Compatibility (HY) -26000 + (ID) 4100
Total energy: -279898.0 ( -82.18 by residue)
QMean score : 0.245
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