Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATGGQQKENTLLHLFAGGCGGTVGAIFTCPLEVIKTRLQSSRLALRTVYYPQVHLGTISGAGMVRPTSVTPGLFQVLKSILEKEGPKSLFRGLGPNLVGVAPSRAVYFACYSKAKEQFNGIFVPNSNIVHIF-----SAGSAAFITNSLMNPIWMVKTRMQLE-QKVRGSKQMNTL-QCARYVYQTEGIRGFYRGLTASYAGISETII----CFAIYESLKKYLKEAPLASSANGTEKNSTSFFGLMAAAALSKGCASCIAYPHEVIRTR-LREEGTK-----YKSFVQTARLVFREEGYLAFYRGLFAQLIRQIPNTAIVLSTYELIVYLLEDRTQ |
| 2C3E Chain:A ((2-293)) | -----DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYK-----------------GIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI---IIYRAAYFGVYDTAKGMLPD----------PKNVHIIVSWMIAQTVT-AVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGM-GGAFVLVLYDEI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80864 for 1969 contacts (-41.1/contact) +
2D Compatibility (PS) -28115 + (NN) -2271 + (LL) 1780
1D Compatibility (HY) -18000 + (ID) 3750
Total energy: -131220.0 ( -66.64 by residue)
QMean score : 0.168
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