Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADQDPAGISPLQQMVASGTGAVVTSLFMTPLDVVKVRLQSQRPSMASELMPSSRLWSLSYTKLPSSLQSTGKCLLYCNGVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFL-----CGRALTSDLYAPMVAGALARLGTVTVISPLELMRTKLQAQ------HVSYRELGACVRTAVAQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSWLNGFRPKDQTSVGMSFVAGGISGTVAAVLTLPFDVVKTQRQVALGAMEAVRVNPLHVDSTWLLLRRIRAESGTKGLFAGFLPRIIKAAPSCAIMISTYEFGKSFFQRLNQDRLLGG |
| 1OKC Chain:A ((2-293)) | -----DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI--------------------------------------------------SAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLP---DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADI----MYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101280 for 2073 contacts (-48.9/contact) +
2D Compatibility (PS) -28456 + (NN) 2131 + (LL) 3896
1D Compatibility (HY) -17200 + (ID) 3100
Total energy: -144009.0 ( -69.47 by residue)
QMean score : 0.188
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