Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEDKRNIQIIEWEHLDKKKFYVFGVAMTMMIRVSVYPFTLIRTRLQVQ------KGKSLYHGTFDAFIKILRADGITGLYRGFLVNTFTLISGQCYVTTYELTRKFVADYSQ-------------SNTVKSLVAGGSASLVAQSITVPIDVVSQHLMMQ-RKGEKMGRFQVRGNPEGQGVVAFGQTKDIIRQILQADGLRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSYLCPKECPHIVFQAVSGPLAAATASILTNPMDVIRTRVQVEG--KNSIIL------TFRQLMAEEGPWGLMKGLSARIISATPSTIVIVVGYESLKKLSLRPELVDSRHW |
| 1OKC Chain:A ((9-293)) | -----------------KDFLAGGVAAAIS-KTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIR------YFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGN--------------CITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLP--DPKNV-HIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVL-YDEI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116409 for 1847 contacts (-63.0/contact) +
2D Compatibility (PS) -25940 + (NN) 7076 + (LL) 3608
1D Compatibility (HY) -15600 + (ID) 3650
Total energy: -150915.0 ( -81.71 by residue)
QMean score : 0.200
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