Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMDSEAHEKRPPILTSSKQDISPHITNVGEMKHYLCGCCAAFNNVAITFPIQKVLFRQQLYGIK-----------TRDAILQL-RRDGFRNLYRGILPPLMQKTTTLALMFGLYEDLSCLLHKHV-----SAPEFATSGVAAVLAGTTEAIF-TPLERVQTLLQDHKHH----DKFTNTYQAFKAL-KCHGIGEYYRGLVPILFRNGLSNVLFFGLRGPIKEHLPTATTHSAHLVNDFICGGLLGAMLGFLFFPINVVKTRIQSQIGG-----EFQSFPKVFQKIWLERDRKLINLFRGAHLNYHRSLISWGIINATYEFLLKVI |
| 1OKC Chain:A ((3-293)) | -------------------------QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEG--PKAFFKGAWSNVLRGMG-GAFVLVLYDEI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83612 for 1945 contacts (-43.0/contact) +
2D Compatibility (PS) -26834 + (NN) -2143 + (LL) 2228
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -124011.0 ( -63.76 by residue)
QMean score : 0.270
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