Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDSEAHEKRPPILTSSKQDISPHITNVGEMKHYLCGCCAAFNNVAITYPIQKVLFRQQLYGIK-----------TRDAVLQL-RRDGFRNLYRGILPPLMQKTTTLALMFGLYEDLSCLLRKHV-----RAPEFATHGVAAVLAGTAEAIF-TPLERVQTLLQNHKHH----DKFTNTYQAFKAL-KCHGIGEYYRGLVPILFRNGLSNVLFFGLRGPIKEHLPTATTHSAHLVNDFIGGGLLGAMLGFLCFPINVVKTRLQSQIGG-----EFQSFPKVFQKIWLERDRKLINLFRGAHLNYHRSLISWGIINATYEFLLKFI |
| 1OKC Chain:A ((4-293)) | --------------------------ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEG--PKAFFKGAWSNVLRGMG-GAFVLVLYDEI---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78910 for 1939 contacts (-40.7/contact) +
2D Compatibility (PS) -26908 + (NN) -3297 + (LL) 2216
1D Compatibility (HY) -10400 + (ID) 2850
Total energy: -120149.0 ( -61.96 by residue)
QMean score : 0.277
|
|
|