Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEQNHSPGKELQHRTRAEAPGKKSWHSQAYALGAVSNFMSTFLTFPIYKVVFRQQIHAM-----------AVSEAVRQLWH-EGPQYFYRGIYPPLLSKTLQGTLLFGTYDSLLCFLSPVG------PHTLGHRWAAGLMSGVVEAVALSPFERVQNVLQDGRKQ----ARFPSTFSILKEF-NSYGLWGRLSLGYYRGFWPVLARNSLGSALYFSFKDPIQDGLAEQGLPHWVPALVSGSVNGTITCLVLYPLIVLVANMQSHIGW----QNMPSLWASAQDVWNTRGRKLLLIYRGGSLVILRSSVTWGLTTAIHDFLQRKSHSRKELKTD |
| 1OKC Chain:A ((2-293)) | ---------------------DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGL-----RGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEG--PKAFFKGAWSNVLRGMG-GAFVLVLYDEI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113380 for 1967 contacts (-57.6/contact) +
2D Compatibility (PS) -26943 + (NN) -1576 + (LL) 2100
1D Compatibility (HY) -4400 + (ID) 2250
Total energy: -146449.0 ( -74.45 by residue)
QMean score : 0.259
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