Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSAIYTVLAGLLFLPLLVNLCCPYFFQDIGYFLKVAAVGRRVRSYGKRRPARTILRAFLEKA-----RQTPHKPFLLFRD-----ETLTYAQVDRRSNQVARALH-DHLGLRQGDCVALLMGNEPAYVWLWLGLVKLGCAMACLNYNIRAKSLLHCFQCCGAKVLLVSPELQAAVEEILPSLKKDDVSIYYVSRTSNTDGIDSFLDKVDEVSTEPIPESWRSEVTFSTPALYIYTSGTTGLPKAAMITHQRIWYGT-GLTFVSGLKADDVIYITLPFYHSAALLIGIHGCIVAGATLALR--TKFSASQFWDDCRKYNVTVIQYIGELLRYLCNSPQKPNDRDHKVRLAL--GNGLRGDVWRQFVKRFGDICIYEFYAATEGNIGFMNYAR---KVGAVGRVNYLQKKIIT-YDLIKYDVEKDEPVRDENGYCVRVPKGEVGLLVCK-----ITQLTPFNGYAGAKAQTEKKKLRDVFKKGDLYFNSGDLLMVDHENFIYFHDRVGDTFRWKGENVATTEVADTVGLVDFVQEVNVYGVHVPDHEGRIGMASIKMKENH-----EFDGKKLFQHIADYLPSYARPRFLRIQDTIEITGTFKHRKMTLVEEGFNPAVIKDALYFLDDTAKMYVPMTEDIYNAISAKTLKL |
| 3C5E Chain:A ((38-562)) | ----------------------------------------------------NFASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGAC-GLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKS--CDGWLNFKKLLNEASTTHH----CVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLS-SYKFPHLQNCVTVGESLLPETLENWRAQTGL-DIRESYGQTETGLTCMVSKTMKIKPGYMGTA-------ASCYDVQIIDDK-----------GNVLPPGTEGDIGIRVKPIRPI--GIFSGYVDNPDKTAANI-------RGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPV-RGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEWK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -397146 for 4248 contacts (-93.5/contact) +
2D Compatibility (PS) -53627 + (NN) -24741 + (LL) 9404
1D Compatibility (HY) -15200 + (ID) 5050
Total energy: -486360.0 ( -114.49 by residue)
QMean score : 0.487
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