Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSVGSQRLEEPSVAGTPDPGVVMSFTFDSHQLEEAAEAAQGQGLRARGVPAFTDTTLDEPVPDDRYHAIYFAMLLAGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVALAAVLLNNVLVERLTLHTRITAGYLLALGPLLFISICDVWLQLFSRDQAYAINLAAV-GTVAFGCTVQQS--SFYGYTG---------MLPKRYTQGVMTGESTAGVMISLSRILTKLLLPDERASTLIFFLVSVALELLCFLLHLLVRRSRFVLFYTTRPRDSHRGRPGLGRGYGYRVHHDVVAGDVHFEHPAPALAPNESPKDSPAHEVTGSGGAYMRFDVPRPRVQR--SWPTFRALLLHR----YVVARVIWADMLSIAVTYFITLCLFPGLESEIRHCILGEWLPILIMAVFNLSDFVGKILAALPVDWRGTHLLACSCLRVVFIPLFILCVYPSGM--PALRHPAWPCIFSLLMGISNGYFGSVPMILAAGKVSPKQRELAGNTMTVSYMSGLTLGSAVAYCTYSLTRDAHGSCLHASTANGSILAGL------ |
| 2P4E Chain:A ((153-682)) | SIPWNLERITPPRYRAGGSL--VEVYLLDTS-IQSDHREIEGRVMVT----DFENVPEEDQASKCDSHGTHLAGVVSGRDAGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVV-LLPLAGGYSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQPVTLGTLGTNFGRCVDLFAPGEDIIGASSDCSTCFVSQSG----TSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHWQLFCRTVWSAHSGPTRMATAIARCAPDEELLSCSSFSRSGKRRGERMEAQGGKLVCRAHNAFGGEGVYAIARCCL--LPQANCSVHTAPPAEASMGTRVH-C-----------------HQQGHVLTGCSSHWEVEDLGPNQCVGHREASIHASCCHAPGLECKVKEHGIPAPQEQVTVACEEGW------TLTGCSALPG--------------TSHVLG------AYAV----DNTCVVRSRSEEAVTAVAICCRSR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2P4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -342147 for 4121 contacts (-83.0/contact) +
2D Compatibility (PS) -49061 + (NN) -6818 + (LL) 4800
1D Compatibility (HY) 4800 + (ID) 3700
Total energy: -392126.0 ( -95.15 by residue)
QMean score : 0.175
|
|
|