Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSSSVKTPALEELVPGSEEKPK----------GRSPLSWGSLFGHRSEKIVFAKSDGGTDENV---------LTVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPP--NFLMTMLFVGLMRFATVVLGLVSL---KNVAVSFAETVKSSA--PIFTVIMSRMILGE---------YTGLLVNLSLIPVMGGLALCTAT-EISFNV-----------LGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFS---YNQDVVLLLLTDGVLFHLQS----------------VTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLLYNKARQHQQE--------ALQSLAAATGRAPDDTVEPLLPQDPR--QHP------------------------------------------------------------------------- |
| 1E6V Chain:A ((8-552)) | LFMKALKEKFE----------ESPEEKYTKFYIFGGWKQSERKKEFKEWADKIVEERGVPHYNPDIGVPLGQRKLMSYQVSGTDVFVEGDDLTFVNNAAMQQMWDDIRRTVIVGMDTAHRVLERRLGKEVTPETINEYMETLNHALPGGAVVQEHMVEIHPGLTWDCYAKIITGDLELADEIDDKFLIDIEKLFPEEQAEQLIKAIGNRTYQVCRMPTIVGHVCDGATMYRWAAMQIAMSFICAYKIAAGEAAVSDFAFASKHAEVINMGEMLPARRARGENEPGGVPFGVLADCVQTMRK-YPDDPAKVALEVIAAGAMLYDQIWLGSYMSGGVGFTQYATAVYPDNILDDYVYYGLEYVEDKYGIAEAEPSMDVVKDVATEVTLYGLEQYERYPAAMETHFGGSQRAAVCAAAAGCSTAFATGHAQAGLNGWYLSQILHKEGQGRLGFYGYALQDQCGAANSLSVRSDEGL-PLELRGPNYPNYAMNVGHLGEYAGIVQAAHAARGDAFCVHPVIKVAFADENLVFDFTEPRKEFAKGALREFEPAGERDLIVPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187188 for 2877 contacts (-65.1/contact) +
2D Compatibility (PS) -40700 + (NN) -16109 + (LL) 936
1D Compatibility (HY) 0 + (ID) 2650
Total energy: -245711.0 ( -85.41 by residue)
QMean score : 0.187
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