Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------MFANLKYVSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMAC--ILLVYKDSKCSLRALNRVLH---DEILNKPMETLKLAIPSGIYTLQNNLLYVA---------LSNLDAATYQVTYQLKILTTALFSVSM----------------------------LSKKLGVYQWLSLVILMTGVAFVQWPSDSQLDSKELSAGSQFVGL-------MAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYIYDG----ELVSKNGFFQGYNRLTWIVVVLQALG----------GLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVF----------FLGAILVITATFLYGYDPKPAGNPTKA----------- |
| 4HE8 Chain:G ((1-467)) | MVVLAVLLPVVFGALLLLGLPRALGVLGAGLSFLLNLYLFLTHPGGVAHAFQAPLLPGAGVYWAFGLDGLSALFFLTIALTVFLGALVARVEGR--FLGLALLMEGLLLGLFAARDLLVFYVFFEAALIPALLMLYLYGGEGRTRALYTFVLFTLVGSLPMLAAVLGARLLSGSPTFLLEDLLAHPLQEEAAFWVFLGFALAFAIKTPLFPLHAWLPPFHQENHPSGLADALGTLYKVGVFAFFRFAIPLAPEGFAQAQGLLLFLAALSALYGAWVAFAAKDFKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEIGRYRGLAQSAPGLAALALILFLAMVGLPGLSGFPGEFLTLLGAYKASPWLAALAFLSVIASAAYALTAFQKTFWEEGGSGVKDLAGAEWGFALLSVLALLLMGVFPGYFARGLHPLAEAFAKLLGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207314 for 2663 contacts (-77.8/contact) +
2D Compatibility (PS) -32882 + (NN) -6036 + (LL) -40
1D Compatibility (HY) -17200 + (ID) 2700
Total energy: -266172.0 ( -99.95 by residue)
QMean score : 0.294
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