Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSL-YTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLS--TSEKIFRFQDTGLLLRVLGSLFLGGILAF-GLGFSEFLLVSRTSSLTLSIAGI--FKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFVAQGQQ |
| 3FWK Chain:A ((1-308)) | ---------------------------------------------GAMVMRLGDAAELCYNLTSSYLQIAAESD----SIIAQTQRAINTTKSILINETFPKWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYYIVK---LPTVFIDHDDTFKTLENFIEETSLRYSLSLYES-------------DRDKCETMAEAFETFLQVFP-------ETKAIVIGIRHTDPFGEHLKPIQKTDANWPDFYRLQP--LLHWNLANIWSFLLYSNEPICELYRYGFTSLGNVEETLPNPHLRKDKNSTPLKLNFEWEIENRYKH------NEVTKAEPIPIADEDLVKIENLHEDYYPGWYLVDDKLERAGRIKKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235864 for 2250 contacts (-104.8/contact) +
2D Compatibility (PS) -28645 + (NN) 9783 + (LL) 7856
1D Compatibility (HY) -5200 + (ID) 2500
Total energy: -254570.0 ( -113.14 by residue)
QMean score : 0.254
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