Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVPPRRHRGAGRPGVLSSSPPFRLRSAKFSGIALEDLRRALKTRLQMVCVFVMNRMNSQNSGFTQRRRMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRGLRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVP-VKFHDLPSEKPESTNIDTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSYPVKEQESILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVDRED-----KLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDP---VMVGIRRIFAFICRKHRIQRVPEDSEQCESLISMHSVSQEDGAS |
| 4HNE Chain:A ((2-384)) | ---------------PLGSPEFAAQAQALAAQAAAAAHAAQAHRER-------NEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSG--SYFVKDPQGRIIAVFKPKNEEPYGHLNPK-WTKWLQKFGRDCLVLNQGYLSEA----GASLVDQKLELNI-----VPRTKVVYLASETFNYSAIDRVKSRGK---RLALRFNRIGLPP----------------------------------KVGSFQLFV--------------------------------------EGYKDADYWLRRFEA-----------------EPLPENTNRQLLLQFERLVVLDYII---RNTDRGNDNWLIKYDCPPVIKVAAIDNGL----AFPLKHPDSWRAYPF----------------------YWAW-----------LPQAKVPFSQEIKDLILPKISD---------PNFVKDLEEDLYELFKK-DPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIVET--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149257 for 2514 contacts (-59.4/contact) +
2D Compatibility (PS) -35195 + (NN) -1739 + (LL) 14704
1D Compatibility (HY) -8800 + (ID) 3800
Total energy: -184087.0 ( -73.22 by residue)
QMean score : 0.209
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