Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTSPSRKYPVKKRVKIHPNTVMVKYTSHYPQPGDDGYEEINEGYGNFMEENPKKGLLSEMKKKGRAFFGTMDTLPPPTEDPMINEIGQFQSFAEKNIFQSRKMWIVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAY-VDMATVVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMWTALFTFGWTGTIWGIS-TMFILQEPIIPLDGETWSYLIAICVCSTAAFL--GVYYALDKFHPALV-----STVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKL------YWRNLRKQDYQEILDSPIK |
| 1OJ7 Chain:A ((19-408)) | KAGLNNFNLHTPTRILFGKG----AIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVLEFGGIE--PNPAYETLMNAVKLVREQKVT--------FLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATG--------------------SESNAGAVISRKTTGDKQAFHSAHV--QPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIHDRFAEGILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -316220 for 3335 contacts (-94.8/contact) +
2D Compatibility (PS) -39202 + (NN) -12797 + (LL) 3052
1D Compatibility (HY) 2400 + (ID) 2000
Total energy: -364767.0 ( -109.38 by residue)
QMean score : 0.339
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