Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTQRLRNEDYHDYSSTDVSPEESPSEGLNNLSSPGSYQRFGQSNSTTWFQTLIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIVAVHCMGILVKCAHHFCRRLNKSFVDYGDTVMYGLESSPCSWLRNHAHWGRRVVDFFLIVTQLGFCCVYFVFLADNFKQVIEAANGTTNNCHNNETVILTPTMDSRLYMLSFLPFLVLLVFIRNLRALSIFS--LLANITMLVSLVMIYQFIVQRIPDPSHLPLVAPW------KTYPLFFGTAIFSFE-GIGMVLPL------ENKMKDPRKFPLILYLGMVIVTILYISLGCLGYLQFGANIQGSITLNLPNCWLYQSVKLLYSIGIFFTYALQFYVPAEIIIPFFVSRAPEHCELVVDLFVRTVLVCLTCILAILIPRLDLVISLVGSVSSSALALIIPPLLEVTTFYSEGMSPLTIFKDALISILGFVGFVVGTYEALYEL-IQPSNAPIFINSTCAFI------------- |
4US3 Chain:A ((10-450)) | ------GREQWA-------SRLGFILAAMGSAVGLGNIWRFSYVTGEN-------------------------------GGAAFLLVYLGFIALIGIPIVLAEFTIGRRAQS-----DAVGSFEKLAPGKPWKVAGLMGVAAG--FLILSFYGVIAGWILFYLFNYITGQLWSAPAEGFGGFFEGFIANPTL-PLFWQALFMIATIWIVAIGVKKGIERSNKILMPLLGVLLIALAIYSLTLGGAKEGLAFLFSPDWSALKDPGVYLAAISQAFFTLSLGMGALITYGSYVSKDSRLPGAAVSVAGLDTAFAIIAGIMIFPAVFALGLSPSGGPGLVFVVLPD--IFDSIRLGPIVGIAFFILLGAAALSSAVSLLEVPVAYFMRKF--DWSRKQAAITLGVIITLLGIPSSLSFGVLGEVT------IIPGLNIFDSVDFIASS--VFLPLGGMIIALFIGWGWKTSDALAESDLTDSVWGKLWILSLRFIAPIAILIVFLSAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4US3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -409333 for 3764 contacts (-108.7/contact) +
2D Compatibility (PS) -41068 + (NN) 3822 + (LL) 4368
1D Compatibility (HY) -21600 + (ID) 3750
Total energy: -467561.0 ( -124.22 by residue)
QMean score : 0.232
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