Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSVTKSTEGPQGAVAIKLDLMSPPESAKKLENKD----------STFLDESPSESAGLKKT---------KGITVFQALIHLVK------------GNMGTGILGLPLAVKNAG------------------------ILMGPLSLLVMGFIACHCMHILVKCA------QRFCKRLNKPFMDYGDTVMHGLEANPNAWLQNHAHWGRH---------------------------IVSFFLIITQLGFCCVYIVFLADNLKQVVEAVNSTTNNCYSNETVILTPTMDSRLYMLSFLPFLVL---------------LVLIRNLRILTIFSMLANI--SMLVSLVIIIQY-------ITQEIPDPSRLPLVASWKTY-PLFFGTAIFSFESIGVVLPLENKMKNARHF-PAILSLGMSIVTSLY-----IGMAALGYLRFGDDIKASISLNLPN------------------------CWLYQSVKLLYIAGILCTYALQFYVPAEIIIPFAISRVST-RWALPLDLSIRLVMVCLTCLLAILIPRLDLVISLVGSVSGTALALIIPPLLEVTTFYSEGMSPLTIFKDALISILGFVGFVVGTYQALDELLKSEDSHPFSNSTTFVR |
| 1QI9 Chain:A ((2-556)) | TCSTSDDADDPTPPNERDDEAFASRVAAAKRELEGTGTVCQINNGET------DLAAKFHKSLPHDDLGQV-DADAFAALEDCILNGDLSICEDVPVGNSE-------------GDPVGRLVNPTAAFAIDISGPAFSATTIPPVPTLPSPELAAQLAEVYWMALARDVPFMQYG---TDDITVTAAANLAGMEGFPN---------LDAVSIGSDGTVDPLSQLFRATFVGVETGPFISQLLVNSFTID-----------------------SITVEPKQETFAPDVN---YMVDFDEWLNIQNGGPPAGPELLDDELRFVRNARDLARVTFTDNINTEAYRGALILLGLDAFNRAGVNGPFIDID---RQAGFVNFGISHYFRLIGAAE-LAQRSSWYQKWQVHRFARPEALGGTLHLTIKG-ELNADFDLSLLENAELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFR-GSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMTFAEESTFEFRLFTGEVIKLFQDGTFTIDGFKC--------PGLVYTGVENCV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -381880 for 3069 contacts (-124.4/contact) +
2D Compatibility (PS) -42030 + (NN) -5238 + (LL) 5908
1D Compatibility (HY) -3600 + (ID) 2950
Total energy: -429790.0 ( -140.04 by residue)
QMean score : 0.235
|
|
|