Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLGRDYNSELNSLDNGPQSPSESSSSITSENVHPAGEAGLSMMQTLIHLLKCNIGTGLLGLPLAIKNAGLLVGPVSLLAIGVLTVHCMVILLNCAQHLSQRLQKTFVNYGEATMYGLETCPNTWLRAHAVWGRYTVSFLLVITQLGFCSVYFMFMADNLQQMVEKAHVTSNICQPREILTLTPILDIRFYMLIILPFLILLVFIQNLKVLSVFSTLANITTLGSMALIFEYIMEGIPYPSNLPLMANWKTFLLFFGTAI--FTFEGVGMVLPLKNQMKHPQQ-FSFVLYLGMSIVIILY-----ILLGTLGYMKFGSDTQASITLNLPNC---WLYQSVKLMYSIGIFFTYALQFHVPAEIIIPFAISQVSESWALFVDLSVRSALVCLTCVSAILIPRLDLVISLVGSVSSSALALIIPALLEIVIFYSEDMS-CVTIAKDIMISIVGLLGCIFGTYQALYELPQPISHSMANSTGVHA------------------- |
| 3GIA Chain:A ((3-435)) | --LKNKK----------------------------------LSLWEAVSMAVGVMIGASIFSI---FGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAK----------------IVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPL------------INAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALL-FNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -481214 for 3648 contacts (-131.9/contact) +
2D Compatibility (PS) -41095 + (NN) -12083 + (LL) 2392
1D Compatibility (HY) -19200 + (ID) 2100
Total energy: -553300.0 ( -151.67 by residue)
QMean score : 0.323
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