Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLETFNAGSDVGSDS-EYESPFMGGARG------HALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW |
| 2D4V Chain:A ((298-391)) | ---------------------------------------------------------------------------------------------------FLQQILL--RPEDYSVV--ATLNLNGDYVSDALAAEVGGIGMAPGANLSDTHAIFEATHGTAPDIAGQG--KANPSSLILSAVMMLEH-------LGWGEAAQAIVAAMNATIAAGEVTGDLAALRGDVPALSTTEFTAALIRRF----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1271 for 491 contacts (2.6/contact) +
2D Compatibility (PS) -9530 + (NN) -4317 + (LL) 16148
1D Compatibility (HY) -6000 + (ID) 1600
Total energy: -4028.0 ( -8.20 by residue)
QMean score : 0.075
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