Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQGHSSVFQALLGTFFTWGMTAAGAALVFVFSSGQRRILDGSLGFAAGVMLAA--SYWSLLAPAVEMATSSGGFGAFAFFPVAVGFTLGAAF-VYLADLL-----MPHLGAAED-----PQTTLALNFGSTLMKKKSDPEGPALLFPES-----ELSIRIGRAGLLSDKSENGEAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMSLDVGLG |
| 3O9Z Chain:D ((5-124)) | ------------------------------------RFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSF--FPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEK-----PLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47606 for 718 contacts (-66.3/contact) +
2D Compatibility (PS) -10615 + (NN) -3811 + (LL) 3064
1D Compatibility (HY) -4400 + (ID) 2000
Total energy: -65368.0 ( -91.04 by residue)
QMean score : 0.021
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