Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MDRGEKIQLKRV---FGYWWGTSFLLINIIGAGIFVSPKGVLAYSCMNVGVSLCVWAGCA----ILAMTSTLCSAEISISFPCSGAQYYFLKRYFGSTVAFLNLWTSLFLGSGVVAGQALLLAEYSIQPFFPSCSVPKLPKKCLALAMLWIVGILTSRGVKEVTWLQIASSVLKVSILSFISLTGVVFLIRGKKENVERFQNAFDAELPDISHLIQAIFQGYFAYSGGACFTLIAGELKKPRTTIPKCIFTALPLVTVVYLLVNISYLTVLTPREILSSDAVAITWADRAFPSLAWIMPFAISTSLFSNLLISIFKSSRPIYLASQEGQLPLLFNTLNSHSSPFTAVLLLVTLGSLAI-ILTSLIDLINYIFFTGSLW----SILLMIGILRRRYQEPNLSIPYKVFLSFPLATIVIDVGLVVIPLVKSPNVHYVYVLLLVL----SGLLFYIPLIHFKIRLAWFEKMTCYLQLLFNICLPDVSEE |
| 4US3 Chain:A ((10-450)) | GREQWASRLGFILAAMGSAVGLGNIWRFSYVTGENGGAAFLLVYLGFIALIGIPIVLAEFTIGRRAQSDAVGSFEKLAPGKPWKVAGLMGVAAGFLILSFYGVIAGWILFYLFNYITGQLWSAPAEGFGGF-FEGFIANPTLPLFWQALFMIATIWIVAIGVKKGIERSNKILMPLLGVLLIALAIYSLT-----LGGAKEGLAFLFSPDWSALKDPGVYLAAISQAFFTLSLG--------------------------------MGALITYGSYVSKDSRLPGAAVSVAGLDTAFAIIAGIMIFPAVFALGLS------PSGGPGLVFVV---LPDIFDSIRL--GPIVGIAFFILLGAAALSSAVSLLEVPVAYFMRKFDWSRKQAAITLGVIITLLGIPSSLSFGVLGEVTIIPGLNIFDSVDFIASSVFLPLGGMIIALFIGWGWKTSDALAESDLTDSVWGKLWILSLRFIAPIAILIVFLSAF-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4US3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -427174 for 3790 contacts (-112.7/contact) +
2D Compatibility (PS) -42622 + (NN) -5363 + (LL) 4488
1D Compatibility (HY) -25600 + (ID) 3650
Total energy: -499921.0 ( -131.91 by residue)
QMean score : 0.255
|
|
|