Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRPGFVAALVAGGVAGVSVDLILFPLDTIKTRLQSPQG-------------------FNKAGGFHGIYAGVPSAAIGSFPNAAAFFITYEYVKWFLHADSS----SYLTPMKHMLAASAGEVVACLIRVPSEVVKQRAQVSA--------STRTFQIFSNILYEEGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDHVVDSWQSAVCGAFAGGFAAAVTTPLDVAKTRITLAKAGS--STADGNVLSVLHGVWRSQGLAGLFAGVFPRMAAISLGGFIFLGAYDRTHSLLLEVGRKSP |
| 1OKC Chain:A ((3-293)) | -QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59531 for 1900 contacts (-31.3/contact) +
2D Compatibility (PS) -26647 + (NN) -2736 + (LL) 668
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -101846.0 ( -53.60 by residue)
QMean score : 0.169
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