Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPRIGPAGEVPQVPDKETKATMGTENTPGGKASPDPQDVRPSVFHNIKLFVLCHSLLQLAQLMISGYLKSSISTVEKRFGLSSQTSGLLASFNEVGNTALIVFVSYFGSRVHRPRMI-GYGAILVALAGLLMTLPHFISEPYRYDNTSPEDMPQDFKASLCLPTTSAPASAPSNGNCSSYTETQHLSVVGIMFVAQTLLGVGGVPIQPFGISYIDDFAHNSNSPLYLGILFAVTMMGPGLAFGLGSLMLRLYVDINQMPEGGISLTIKDPRWVGAWWLGFLIAAGAVALAAIPYFFFPKEMPKEKRELQFRRKVLAVTDSPARKGKDSPSKQSPGESTKKQDGLVQIAPNLTVIQFIKVFPRVLLQTLRHPIFLLVVLSQVCLSSMAAGMAIFLPKFLERQFSITASYANLLIGCLSFPSVIVGIVVGGVLVKRLHLGPVGCGALCLLGMLLCLFFSLPLFFIGCSSHQIAGITHQTSAHPGLELSPSCMEACSCPLDGFNPVCDPSTRVEYITPCHAGCSSWVVQDALDNSQVFYTNCSCVVEGNPVLAGSCDSTCSHLVVPFLLLVSLGSALACLTHTPSFMLILRGVKKEDKTLAVGIQFMFLRILAWMPSPVIHGSAIDTTCVHWALSCGRRAVCRYYNNDLLRNRFIGLQFFFKTGSVICFALVLAVLRQQDKEARTKESRSSPAVEQQLLVSGP-----GKKPEDSRV- |
| 2OCC Chain:A ((1-514)) | ----------------------MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLG-----------------DDQIYNVVVTAHAFVMIFFM----VMPIMIGGFGNWLVPLMIGAPDMAF-----PRMNNMSFWLLPPSFLLLLASSMVE-----AGAGT--------------------------GWTVYP---PLAGNLAHA----------------GASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWS--VMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD-------------------------------PILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKE---------------PFGYMGMVWAMMSIGFLGFIVWAHHMFTVG------MDVDTRAYFTSATMIIAIPTGVKV-FSWLATLHGG--------------------------NIKWSPAMMWALGFIFLFTVGGLTGIVLAN----SSLDIVLHDT-----YYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFF-----------PQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVL---TVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292840 for 4432 contacts (-66.1/contact) +
2D Compatibility (PS) -51649 + (NN) -2153 + (LL) 10120
1D Compatibility (HY) -29600 + (ID) 4150
Total energy: -370272.0 ( -83.55 by residue)
QMean score : 0.223
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