Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSGAWKRLKSMLRKDDAPLFLNDTSAFDFSDEAGDEGLSRFNKLRVVVADDGSEAPERPVNGAHPTLQADDDSLLDQDLPLTNSQLSLKVDSCDNCSKQREILKQRKVKARLTIAAVLYLLFMIGELVGGYIANSLAIMTDALHMLTDLSAIILTLLALWLSSKSPTKRFTFGFHRLEVLSAMISVLLVYILMGFLLYEAVQRTIHMNYEINGDIMLITAAVGVAVNVIMGFLLNQSGHRHSHSHSLPSNSPTRGSGCERNHGQDSLAVRAAFVHALGDLVQSVGVLIAAYIIRFKPEYKIADPICTYVFSLLVAFTTFRIIWDTVVIILEGVPSHLNVDYIKEALMKIEDVYSVEDLNIWSLTSGKSTAIVHIQLIPGSS-SKWEEVQSKANHLLLNTFGMYRCTIQLQSYRQEVDRTCANCQSSSP |
3H90 Chain:A ((2-283)) | -------------------------------------------------------------------------------------------------------------VSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVR-----------------------RTQSQAVRADMLHYQSDVMMNGAILLALGLSWY--GWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQSGPTR-FIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220392 for 2094 contacts (-105.2/contact) +
2D Compatibility (PS) -29246 + (NN) -13168 + (LL) 5236
1D Compatibility (HY) -12400 + (ID) 2300
Total energy: -272270.0 ( -130.02 by residue)
QMean score : 0.267
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