Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPLSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLNLSFAFVELLYGIWSNCLGLISDSFHMFFDSTAILAGLAASVISKWRDNDAFSYGYVRAEVLAGFVNGLFLIFTAFFIFSEGVERALAPPDVHH-ERLLLVSILGFVVNLIGIFVFKHGGHGHSHGSGHGHSHSLFNGALDQAHGHVDHCHSHEVKHGAAHSHDHAHGHGHFHSHDGPSLKETTGPSRQILQGVFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPLLENSLPQCYQRVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIVAPD---ADARWILSQT-HNIFTQAGVRQLYVQIDFAAM |
3J1Z Chain:P ((7-290)) | -----------------------------YDFWVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKRAL---------------------------------------------------------------AATNSTVVEADSLHYKSDLFLNAAVLLALVLSQ-YGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQR--IKLIAKEDPRVLGLHDLRTRQAGKTVF-IQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213474 for 2103 contacts (-101.5/contact) +
2D Compatibility (PS) -28604 + (NN) -5637 + (LL) 2336
1D Compatibility (HY) -10800 + (ID) 2600
Total energy: -258779.0 ( -123.05 by residue)
QMean score : 0.242
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