@TOME V3
(Feb 2022)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : H_NR2E3_PNR: (2021-05-27 )
METRPTALMSSTVAAAAPAAGAASRKESPGRWGLGEDPTGVSPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVAPPAPAGRSPRGPTPMSAARALGHHFMASLITAETCAKLEPEDADENIDVTSNDPEFPSSPYSSSSPCGLDSIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPLLAPPEASAAGGAQGRLTLASMETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLKDPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFITAERIELLFFRKTIGNTPMEKLLCDMFKN

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.-......130.......140.......150.......160.......170.......180.......190.......200.......210----........220.......230.......240.......250.......260.......270.......280------.........290.......300.......310.......320.......330-........340.......350.......360.......370.......380.......390.......400.......410
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) METRPTALMSSTVAAAAPAAGAASRKESPGRWGLGEDPTGVSPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQ-PRSTAQVHLDSMESNTESRPESLVAPPAPAGRSPRGPTPMSAARALGHHFMASLITAETCAKLEPEDADENIDVTSNDPEFPSSPYSS-----SSPCGLDSIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPLLAP--------PEASAAGGAQGRLTLASMETRVLQETISRFRALAVDPTEFACMKALVLFKP--ETRGLKDPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFITAERIELLFFRKTIGNTPMEKLLCDMFKN
1 PsiBlast_PDB 70.4999%-174 - C1 - - 4LOG - MALE_ECOLI (first) A:[1217-1410] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDSIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPLLAP--------P-----------LTLASMETRVLQETISRFRALAVDPTEFACMKALVLFKP--ETRGLKDPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFITAERIELLFFRKTIGNTPMEKLLSDMFKN
3 PsiBlast_PDB 68.9036%-125 - C1 - - 5UAN RXRA_HUMAN A:[38-359] ----------------------------------------------CAICGDRSSGKHYGVYSCEGCKGFFKRTVR----------KD-CLIDKRQRN-CQYCRYQKCLAMGMKREAVQEER----------------ANEDMPVERILE-AELAVE---------------------------------------------------PVTN-------------ICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHS-AGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
5 PsiBlast_PDB 64.7036% -53 - C1 - - 3E00 RXRA_HUMAN A:[140-460] ----------------------------------------------CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD-CLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQR--------------ANEDMPVERILE-AELAVE----------------------------------------------------VTN-------------ICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML--
2 PsiBlast_PDB 64.4236% -40 - C1 - - 4NQA RXRA_HUMAN A:[38-359] ----------------------------------------------CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD-CLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG-----------SSANEDMPVERILE-AELAVEPKTETY-EANMGL-------------------------------NPSSPNDPVTN-------------ICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHS-AGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
4 PsiBlast_PDB 61.5036% -57 - C1 - - 3DZU RXRA_HUMAN A:[140-460] ----------------------------------------------CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD-CLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQR--------------ANEDMPVERILE-AELA----------------------------------------------------DPVTN-------------ICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML--
8 PsiBlast_PDB 58.6133% -57 - C1 - - 4IQR HNF4A_HUMAN A:[21-335] ----------------------------------------------CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRF-SRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE-------------------------INALLQAEVLSRQITSPVSG------------INGDIRAKKIASIAD--------------------------------VCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELA---------EMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDP--DAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEML--
16 PsiBlast_PDB 43.2037%-124 - C1 - - 3KWY RXRA_HUMAN A:[18-238] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEAELAVEP-----------------------DP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD--IDTFLMEMLE-
20 PsiBlast_PDB 42.9237%-122 * C1 * - 6STI RXRA_HUMAN A:[18-238] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEAELAVE------------------------DP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
15 PsiBlast_PDB 42.7337%-122 - C1 - - 3E94 RXRA_HUMAN A:[18-238] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEAELAVE------------------------DP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
10 PsiBlast_PDB 40.8937%-105 - C1 - - 1DKF RXRA_MOUSE A:[2-232] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEAELAV----ETYVEANMGLNP--P-----NDP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASASHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
9 PsiBlast_PDB 40.3337%-113 - C1 - - 5JI0 RXRA_HUMAN A:[16-235] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEAELAVEPKTETYVE---------------NDP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRFIGLKCLEHLFFFKLIGDT---TFLMEML--
12 PsiBlast_PDB 40.0737%-113 - C1 - - 4OC7 RXRA_HUMAN A:[28-248] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEAELAVE-----------------P-----NDP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
14 PsiBlast_PDB 38.2337%-140 - C1 - - 6JNO RXRA_HUMAN A:[45-237] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
13 PsiBlast_PDB 37.9637%-140 - C1 - - 5ZQU RXRA_HUMAN A:[44-237] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
19 PsiBlast_PDB 37.7437%-140 - C1 - - 5TBP RXRA_HUMAN A:[45-238] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
18 PsiBlast_PDB 37.6837%-137 - C1 - - 4N8R RXRA_HUMAN A:[45-238] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
17 PsiBlast_PDB 37.6337%-142 - C1 - - 4N5G RXRA_HUMAN A:[45-238] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
6 PsiBlast_PDB 37.5848%-106 - C1 - - 4XAJ - MALE_ECO57 (first) A:[376-574] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAV--------SGMNGDNTDSQRLTLIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVP-LRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPVRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYK-
11 PsiBlast_PDB 36.7937% -95 - C1 - - 6HN6 RXRA_HUMAN A:[56-276] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEAELAVEPKTETYVEANMGLNPSSP-----NDP--VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLAT--------GLHVHRNSAHSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP--DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE-
7 PsiBlast_PDB 12.0143% -31 - C1 - - 3CJW - COT2_HUMAN A:[172-400] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YPTSRFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAA--------AG-----------------IRIFQEQVEKLKALHVDSAEYSCLKAIVLFTS--DACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDML--