@TOME V3
(Feb 2022)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : H_NR2A2_HNF4g: (2021-05-27 )
MNTTDNGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSSTDINVKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDILLLGNNYVIHRNSCEVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGGASNDGSHLHHPMHPHLSQDPLTGQTILLGPMSTLVHADQISTPETPLPSPPQGSGQEQYKIAANQASVISHQHLSKQKQL

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130..-.-....140.......150.......160.......170.......180.......190.......200......-.-210........220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400......
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) MNTTDNGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSSTDINVKKIA-S-IGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDILLLGNNYVIHRNSC-E-V-EISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGGASNDGSHLHHPMHPHLSQDPLTGQTILLGPMSTLVHADQISTPETPLPSPPQGSGQEQYKIAANQASVISHQHLSKQKQL
1 PsiBlast_PDB 84.3982% -77 - C1 - - 4IQR HNF4A_HUMAN A:[19-338] ---------ALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNE------------------INALLQAEVLSRQITSPVSGINGDIRAKKIA-S-IADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCP-E-LAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGG--------------------------------------------------------------------------------
2 PsiBlast_PDB 64.77100%-147 - C1 - - 1LV2 HNF4G_HUMAN A:[4-229] ------------------------------------------------------------------------------------------------------SINTLAQAEVRSRQISV----SSTDINVKKIA-S-IGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDILLLGNNYVIHRNSC-E-V-EISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGG--------------------------------------------------------------------------------
9 PsiBlast_PDB 61.7342% -83 - C1 - - 3E00 RXRA_HUMAN A:[139-460] ----------ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQR---------ANEDMPVERILEAELAVE----------------------VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHS-A-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
10 PsiBlast_PDB 61.1642% -23 - C1 - - 4NQA RXRA_HUMAN A:[37-358] ----------ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG------SSANEDMPVERILEAELAVEPKTETY-EANMGLNPSSPN-DPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
6 PsiBlast_PDB 58.2478% -74 - C1 - - 1PZL HNF4A_HUMAN A:[5-237] -------------------------------------------------------------------------------------------------LASLPSINALLQAEVLSRQIT------NGDIRAKKIA-S-IADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCP-E-LAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGS-------------------------------------------------------------------------------
8 PsiBlast_PDB 56.9342% -32 - C1 - - 3DZU RXRA_HUMAN A:[139-460] ----------ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQR---------ANEDMPVERILEAELA---------------------DP-VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHS-A-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
7 PsiBlast_PDB 56.4180% -75 - C1 - - 3FS1 HNF4A_HUMAN A:[1-230] ---------------------------------------------------------------------------------------------------SLPSINALLQAEVLSRQITSPVSGINGDIRAKKIA-S-IADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCP-E-LAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGG--------------------------------------------------------------------------------
11 PsiBlast_PDB 50.5342% -24 - C1 - - 5UAN RXRA_HUMAN A:[37-358] ----------ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKD----------CLIDKRQRN-CQYCRYQKCLAMGMKREAVQEER-----------ANEDMPVERILEAELAVE---------------------PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
3 PsiBlast_PDB 50.3276% -80 - C1 - - 1M7W HNF4A_RAT A:[10-235] ------------------------------------------------------------------------------------------------------SINALLQAEVLSQQITSPIS---GDIRAKRIA-S-ITDVCESMKEQLLVLVEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCP-E-LAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLG---------------------------------------------------------------------------------
4 PsiBlast_PDB 45.8078% -82 - C1 - - 6CHT HNF4A_HUMAN A:[5-230] ------------------------------------------------------------------------------------------------------SINALLQAEVL----------------AKKIA-S-IADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCP-E-LAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLG---------------------------------------------------------------------------------
5 PsiBlast_PDB 37.2379% -73 - C1 - - 4B7W - HNF4A_HUMAN A:[175-376] ------------------------------------------------------------------------------------------------------------------------------DIRAKKIA-S-IADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCP-E-LAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLG---------------------------------------------------------------------------------
19 PsiBlast_PDB 25.5044% -89 - C1 - - 3KWY RXRA_HUMAN A:[47-237] -----------------------------------------------------------------------------------------------------------------------------------------VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD--IDTFLMEML-----------------------------------------------------------------------------------
18 PsiBlast_PDB 25.4244% -83 * C1 * - 3E94 RXRA_HUMAN A:[47-237] -----------------------------------------------------------------------------------------------------------------------------------------VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
15 PsiBlast_PDB 25.3344% -80 - C1 - - 4OC7 RXRA_HUMAN A:[57-247] -----------------------------------------------------------------------------------------------------------------------------------------VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
14 PsiBlast_PDB 22.9045% -86 - C1 - - 1DKF RXRA_MOUSE A:[41-231] -----------------------------------------------------------------------------------------------------------------------------------------VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASASHRSIAVKDGILLATGLHVHRNSAHS-A-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
17 PsiBlast_PDB 21.9544%-106 - C1 - - 6JNO RXRA_HUMAN A:[46-236] -----------------------------------------------------------------------------------------------------------------------------------------VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
16 PsiBlast_PDB 21.7744%-107 - C1 - - 5ZQU RXRA_HUMAN A:[46-236] -----------------------------------------------------------------------------------------------------------------------------------------VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
20 PsiBlast_PDB 18.9544%-102 - C1 - - 4N5G RXRA_HUMAN A:[47-237] -----------------------------------------------------------------------------------------------------------------------------------------VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------
13 PsiBlast_PDB 17.4738%-105 - C1 - - 1Z5X - ? U:[66-256] -----------------------------------------------------------------------------------------------------------------------------------------VSDICQAADRQLYQLIEWAKHIPHFTELPVEDQVILLKSGWNELLIAGFSHRSMSVKDGIMLATGLVVHRNCAHQ-A-GVGAIFDRVLTELVAKMREMKMDKTELGCLRSIVLFNPEAKGLKSTQQVENLREKVYAILEEYCRQTYPDQSGRFAKLLLRLPALRSIGLKCLEHLFFFKLVGNTSIDSFLLSML-----------------------------------------------------------------------------------
12 PsiBlast_PDB 14.5838% 11 - C1 - - 6HN6 RXRA_HUMAN A:[45-275] ------------------------------------------------------------------------------------------------SANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPN-DPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA-HSA-GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML-----------------------------------------------------------------------------------