@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : STK38_HUMAN: (2019-05-27 )
MAMTGSTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYKNKDWVFINYTYKRFEGLTARGAIPSYMKAAK
Atome Classification :
(2 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
MAMTGSTP
C
S
S
M
SNHTKE
R
V
T
M
T
K
V
T
L
E
N
F
Y
S
N
L
I
A
Q
H
E
E
R
E
M
R
Q
K
K
L
E
K
V
M
E
EEGL
K
D
E
E
K
R
L
R
R
S
AHAR
K
E
T
E
F
L
R
L
K
R
T
RLG
L
E
D
F
E
S
L
K
V
IGRGAFG
E
V
R
L
V
Q
KKDT
G
H
V
Y
A
M
K
I
L
R
K
A
D
M
L
E
K
E
QVGHIRAER
D
I
L
V
EADS
L
W
V
V
K
M
F
Y
S
F
Q
DK
L
N
L
Y
L
I
M
E
FLPGG
D
M
M
T
L
L
MKKDTL
T
E
E
E
T
Q
F
Y
I
A
E
T
V
L
A
I
D
S
I
H
Q
L
G
F
I
HRDIKPD
N
L
L
LDSKG
H
V
K
L
S
D
F
G
L
C
T
G
L
K
K
A
H
R
T
E
F
Y
R
N
LNHSLPSD
F
T
FQNMNS
K
R
K
A
E
T
W
K
R
N
R
R
Q
L
A
F
STVGTPDY
I
A
P
E
V
F
M
Q
TG
Y
N
K
L
C
D
W
W
S
L
G
V
I
M
Y
E
M
LIGYPPFCSE
T
P
Q
E
T
Y
K
K
V
M
N
W
K
E
TLTFPPEVP
I
S
E
K
A
K
D
L
I
L
R
F
C
C
E
W
E
HRIGAP
G
V
E
E
I
KSNSFFEGV
D
W
E
H
I
RERP
A
A
I
S
I
E
I
K
SIDDTSNFDEFPESDILKPTVATSNHPETDYKNK
D
W
V
F
I
N
Y
T
Y
K
RFEGLTARGA
I
P
S
Y
M
K
AAK
1
PsiBlast_PDB
89.10
100%
-96
- C1 -
-
6BXI
1
STK38_HUMAN
A:
[1-333]
---------------------------------------------------------------------------------
T
R
L
G
L
E
D
F
E
S
L
K
V
I
G
R
G
A
F
G
E
V
R
L
V
Q
K
K
D
T
G
H
V
Y
A
M
K
I
L
R
K
A
D
M
L
E
K
E
Q
V
G
H
I
R
A
E
R
D
I
L
V
E
A
D
S
L
W
V
V
K
M
F
Y
S
F
Q
D
K
L
N
L
Y
L
I
M
E
F
L
P
G
G
D
M
M
T
L
L
M
K
K
D
T
L
T
E
E
E
T
Q
F
Y
I
A
E
T
V
L
A
I
D
S
I
H
Q
L
G
F
I
H
R
D
I
K
P
D
N
L
L
L
D
S
K
G
H
V
K
L
S
D
F
G
L
C
T
G
L
K
K
A
H
R
T
E
F
Y
R
N
L
N
H
S
L
P
S
D
F
T
F
Q
N
M
N
S
K
R
K
A
E
T
W
K
R
N
R
R
Q
L
A
F
S
T
V
G
T
P
D
Y
I
A
P
E
V
F
M
Q
T
G
Y
N
K
L
C
D
W
W
S
L
G
V
I
M
Y
E
M
L
I
G
Y
P
P
F
C
S
E
T
P
Q
E
T
Y
K
K
V
M
N
W
K
E
T
L
T
F
P
P
E
V
P
I
S
E
K
A
K
D
L
I
L
R
F
C
C
E
W
E
H
R
I
G
A
P
G
V
E
E
I
K
S
N
S
F
F
E
G
V
D
W
E
H
I
R
E
R
P
A
A
I
S
I
E
I
K
S
I
D
D
T
S
N
F
D
E
F
P
---------------------------------------------------
21
Blastp_CBE
88.29
100%
-95
- C1 -
-
6BXI
1
STK38_HUMAN
B:
[2-333]
----------------------------------------------------------------------------------
R
L
G
L
E
D
F
E
S
L
K
V
I
G
R
G
A
F
G
E
V
R
L
V
Q
K
K
D
T
G
H
V
Y
A
M
K
I
L
R
K
A
D
M
L
E
K
E
Q
V
G
H
I
R
A
E
R
D
I
L
V
E
A
D
S
L
W
V
V
K
M
F
Y
S
F
Q
D
K
L
N
L
Y
L
I
M
E
F
L
P
G
G
D
M
M
T
L
L
M
K
K
D
T
L
T
E
E
E
T
Q
F
Y
I
A
E
T
V
L
A
I
D
S
I
H
Q
L
G
F
I
H
R
D
I
K
P
D
N
L
L
L
D
S
K
G
H
V
K
L
S
D
F
G
L
C
T
G
L
K
K
A
H
R
T
E
F
Y
R
N
L
N
H
S
L
P
S
D
F
T
F
Q
N
M
N
S
K
R
K
A
E
T
W
K
R
N
R
R
Q
L
A
F
S
T
V
G
T
P
D
Y
I
A
P
E
V
F
M
Q
T
G
Y
N
K
L
C
D
W
W
S
L
G
V
I
M
Y
E
M
L
I
G
Y
P
P
F
C
S
E
T
P
Q
E
T
Y
K
K
V
M
N
W
K
E
T
L
T
F
P
P
E
V
P
I
S
E
K
A
K
D
L
I
L
R
F
C
C
E
W
E
H
R
I
G
A
P
G
V
E
E
I
K
S
N
S
F
F
E
G
V
D
W
E
H
I
R
E
R
P
A
A
I
S
I
E
I
K
S
I
D
D
T
S
N
F
D
E
F
P
---------------------------------------------------