@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : ACV1B_HUMAN: (2019-04-26 )
MAESAGASSFFPLVVLLLAGSGGSGPRGVQALLCACTSCLQANYTCETDGACMVSIFNLDGMEHHVRTCIPKVELVPAGKPFYCLSSEDLRNTHCCYTDYCNRIDLRVPSGHLKEPEHPSMWGPVELVGIIAGPVFLLFLIIIIVFLVINYHQRVYHNRQRLDMEDPSCEMCLSKDKTLQDLVYDLSTSGSGSGLPLFVQRTVARTIVLQEIIGKGRFGEVWRGRWRGGDVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTIEGMIKLALSAASGLAHLHMEIVGTQGKPGIAHRDLKSKNILVKKNGMCAIADLGLAVRHDAVTDTIDIAPNQRVGTKRYMAPEVLDETINMKHFDSFKCADIYALGLVYWEIARRCNSGGVHEEYQLPYYDLVPSDPSIEEMRKVVCDQKLRPNIPNWWQSYEALRVMGKMMRECWYANGAARLTALRIKKTLSQLSVQEDVKI
Atome Classification :
(1 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
MAESAGA
S
S
F
F
P
L
V
V
L
L
L
AGSGGSG
P
R
G
V
Q
A
L
L
C
A
C
T
S
C
L
QANYTCETDG
A
C
M
V
S
I
F
NLDG
M
E
H
H
V
R
T
CIP
K
V
E
L
VPAGK
P
F
Y
CL
S
S
E
DLRNT
H
C
C
Y
T
DYC
N
R
I
D
L
RVPSGHLKEPEHPSMWG
P
V
E
L
V
G
I
I
A
G
P
V
F
L
L
F
L
I
I
I
I
V
F
L
V
I
N
Y
H
Q
R
V
Y
H
N
R
QRLDMEDP
S
C
E
M
CLSKDK
T
L
Q
D
L
V
Y
D
LSTSGSGSG
L
P
L
F
V
Q
R
T
V
A
R
T
I
V
L
Q
E
I
IGKGRF
G
E
V
WRGRWRG
G
D
V
A
V
K
I
FSS
R
E
E
R
S
W
F
R
E
A
E
I
Y
Q
T
V
M
L
RHE
N
I
L
G
F
I
AADNKDNG
T
W
T
Q
L
W
L
V
S
D
Y
H
EHG
S
L
F
D
Y
L
N
R
Y
T
V
T
I
E
G
M
I
K
L
A
L
S
AASG
L
A
H
L
H
M
E
I
VGTQGKPGIAHRDLKSK
N
I
L
V
KKNG
M
C
A
I
ADL
G
L
A
V
RHDAVT
D
T
I
DIAPNQRVGTKRYM
A
P
E
V
L
D
E
TINMKHFDSFK
C
A
D
I
Y
A
L
G
L
V
Y
W
E
I
A
R
RCNSGGVHEEYQL
P
Y
Y
DLVPSDP
S
I
E
E
M
R
K
V
V
CDQKLRPNI
P
N
W
W
Q
S
Y
E
A
L
R
V
M
G
K
M
M
R
E
C
WYANG
A
A
R
L
T
A
L
R
I
K
K
T
L
S
Q
L
S
V
QEDVKI
18
PsiBlast_PDB
43.92
90%
-109
- C1 -
-
1RW8
1
TGFR1_HUMAN
A:
[1-300]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
A
R
T
I
V
L
Q
E
S
I
G
K
G
R
F
G
E
V
W
R
G
K
W
R
G
E
E
V
A
V
K
I
F
S
S
R
E
E
R
S
W
F
R
E
A
E
I
Y
Q
T
V
M
L
R
H
E
N
I
L
G
F
I
A
A
D
N
K
D
N
G
T
W
T
Q
L
W
L
V
S
D
Y
H
E
H
G
S
L
F
D
Y
L
N
R
Y
T
V
T
V
E
G
M
I
K
L
A
L
S
T
A
S
G
L
A
H
L
H
M
E
I
V
G
T
Q
G
K
P
A
I
A
H
R
D
L
K
S
K
N
I
L
V
K
K
N
G
T
C
C
I
A
D
L
G
L
A
V
R
H
D
S
A
T
D
T
I
D
I
A
P
N
H
R
V
G
T
K
R
Y
M
A
P
E
V
L
D
D
S
I
N
M
K
H
F
E
S
F
K
R
A
D
I
Y
A
M
G
L
V
F
W
E
I
A
R
R
C
S
I
G
G
I
H
E
D
Y
Q
L
P
Y
Y
D
L
V
P
S
D
P
S
V
E
E
M
R
K
V
V
C
E
Q
K
L
R
P
N
I
P
N
R
W
Q
S
C
E
A
L
R
V
M
A
K
I
M
R
E
C
W
Y
A
N
G
A
A
R
L
T
A
L
R
I
K
K
T
L
S
Q
L
S
Q
Q
E
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