@TOME V3
(Feb 2022)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : CLK4_HUMAN: (2019-04-28 )
MRHSKRTHCPDWDSRESWGHESYRGSHKRKRRSHSSTQENRHCKPHHQFKESDCHYLEARSLNERDYRDRRYVDEYRNDYCEGYVPRHYHRDIESGYRIHCSKSSVRSRRSSPKRKRNRHCSSHQSRSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPQHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPTQRITLDEALQHPFFDLLKKK
Atome Classification :
(1 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
MRHSKRTHCPDWDS
R
E
SWGHESYR
G
S
H
K
R
K
RRSHSSTQENRHCKPHHQFKESD
C
H
Y
L
E
ARSLNERD
Y
R
D
R
R
Y
V
D
E
Y
R
N
D
Y
CEGY
V
P
R
H
Y
H
R
DIESG
Y
R
I
H
CSK
S
S
V
R
S
RRSS
P
K
R
K
R
N
RHCSS
H
Q
S
R
S
K
S
H
R
R
K
RSRSIEDDEE
G
H
L
I
CQSGD
V
L
R
A
R
Y
E
I
V
D
T
LGE
G
A
F
G
K
V
V
E
C
I
D
HGMD
G
M
H
V
A
V
K
I
V
K
N
V
G
R
Y
R
E
A
A
R
S
E
I
Q
V
L
E
H
LNSTD
P
N
S
V
F
R
C
V
Q
M
L
E
W
F
DHHG
H
V
C
I
V
F
E
L
LGL
S
T
Y
D
F
I
KENSFLP
F
Q
I
D
H
I
R
Q
M
A
Y
Q
I
C
Q
S
I
N
F
L
HHNKLTHTDLKPE
N
I
L
F
V
KS
D
Y
V
V
KYNSKMKR
D
E
RTLKNT
D
I
K
V
V
DFGSATYDDEH
H
S
T
L
V
S
TRHYRAP
E
V
I
L
ALGWSQPC
D
V
W
S
I
G
C
I
L
I
E
Y
Y
LG
F
T
V
F
QTHD
S
K
E
H
L
A
M
M
E
R
I
LGPI
P
Q
H
M
I
Q
K
T
R
K
R
KYFHHNQLDWDEHS
S
A
G
R
Y
V
R
R
R
C
K
P
L
K
E
F
M
L
CH
D
E
E
H
E
K
L
F
D
L
V
R
R
M
LEYDPTQRI
T
L
D
E
A
L
Q
H
P
F
F
D
L
LKKK
1
PsiBlast_PDB
76.31
100%
-142
- C1 -
-
6FYV
1
CLK4_HUMAN
A:
[5-336]
---------------------------------------------------------------------------------------------------------------------------------------------------
I
C
Q
S
G
D
V
L
R
A
R
Y
E
I
V
D
T
L
G
E
G
A
F
G
K
V
V
E
C
I
D
H
G
M
D
G
M
H
V
A
V
K
I
V
K
N
V
G
R
Y
R
E
A
A
R
S
E
I
Q
V
L
E
H
L
N
S
T
D
P
N
S
V
F
R
C
V
Q
M
L
E
W
F
D
H
H
G
H
V
C
I
V
F
E
L
L
G
L
S
T
Y
D
F
I
K
E
N
S
F
L
P
F
Q
I
D
H
I
R
Q
M
A
Y
Q
I
C
Q
S
I
N
F
L
H
H
N
K
L
T
H
T
D
L
K
P
E
N
I
L
F
V
K
S
D
Y
V
V
K
Y
N
---
K
R
D
E
R
T
L
K
N
T
D
I
K
V
V
D
F
G
S
A
T
Y
D
D
E
H
H
S
T
L
V
S
T
R
H
Y
R
A
P
E
V
I
L
A
L
G
W
S
Q
P
C
D
V
W
S
I
G
C
I
L
I
E
Y
Y
L
G
F
T
V
F
Q
T
H
D
S
K
E
H
L
A
M
M
E
R
I
L
G
P
I
P
Q
H
M
I
Q
K
T
R
K
R
K
Y
F
H
H
N
Q
L
D
W
D
E
H
S
S
A
G
R
Y
V
R
R
R
C
K
P
L
K
E
F
M
L
C
H
D
E
E
H
E
K
L
F
D
L
V
R
R
M
L
E
Y
D
P
T
Q
R
I
T
L
D
E
A
L
Q
H
P
F
F
D
L
L
K
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