@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : MP2K6_HUMAN: (2019-05-02 )
MSQSKGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLILGD
Atome Classification :
(2 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
MSQSKGKKRNPGLKI
P
K
E
A
FEQPQTSSTPPRDLD
S
K
A
C
ISIGNQ
N
F
E
V
KAD
D
L
E
P
I
M
E
LGR
G
A
Y
G
V
V
E
K
M
R
HVPSG
Q
I
M
A
V
K
R
I
R
A
TVN
S
Q
E
Q
K
R
L
L
M
DLD
I
S
M
R
TVDC
P
F
T
V
T
F
Y
G
A
L
FREG
D
V
W
I
C
M
E
L
M
D
T
S
L
D
K
F
Y
K
Q
V
I
DKGQTI
P
E
D
I
L
G
K
I
A
V
S
I
V
K
A
L
E
H
L
H
S
K
L
S
V
I
HRDVKP
S
N
V
L
I
N
ALGQ
V
K
M
C
DFGIS
G
Y
L
V
D
S
V
A
K
T
I
DAGCKPYMAPERINP
E
L
NQKGYS
V
K
S
D
I
W
S
L
G
I
T
M
I
E
L
A
I
L
RFPYDSWG
T
P
F
Q
Q
L
K
Q
V
V
EEPSPQLP
A
D
K
F
S
A
E
F
V
D
F
T
S
Q
C
L
KKNSKERPT
Y
P
E
L
M
QHP
F
F
T
L
HESKGT
D
V
A
S
F
V
K
L
I
LGD
1
PsiBlast_PDB
90.57
100%
-113
- C1 -
-
3VN9
1
MP2K6_HUMAN
A:
[44-334]
-------------------------------------------
Q
N
F
E
V
K
A
D
D
L
E
P
I
M
E
L
G
R
G
A
Y
G
V
V
E
K
M
R
H
V
P
S
G
Q
I
M
A
V
K
R
I
R
A
T
V
N
S
Q
E
Q
K
R
L
L
M
D
L
D
I
S
M
R
T
V
D
C
P
F
T
V
T
F
Y
G
A
L
F
R
E
G
D
V
W
I
C
M
E
L
M
D
T
S
L
D
K
F
Y
K
Q
V
I
D
K
G
Q
T
I
P
E
D
I
L
G
K
I
A
V
S
I
V
K
A
L
E
H
L
H
S
K
L
S
V
I
H
R
D
V
K
P
S
N
V
L
I
N
A
L
G
Q
V
K
M
C
D
F
G
I
S
G
Y
L
V
D
S
V
A
K
T
I
D
A
G
C
K
P
Y
M
A
P
E
R
I
N
P
E
L
N
Q
K
G
Y
S
V
K
S
D
I
W
S
L
G
I
T
M
I
E
L
A
I
L
R
F
P
Y
D
S
W
G
T
P
F
Q
Q
L
K
Q
V
V
E
E
P
S
P
Q
L
P
A
D
K
F
S
A
E
F
V
D
F
T
S
Q
C
L
K
K
N
S
K
E
R
P
T
Y
P
E
L
M
Q
H
P
F
F
T
L
H
E
S
K
G
T
D
V
A
S
F
V
K
L
I
L
G
D
2
PsiBlast_PDB
83.14
98%
-125
- C1 -
-
3FME
1
MP2K6_HUMAN
A:
[2-289]
---------------------------------------------
M
E
V
K
A
D
D
L
E
P
I
M
E
L
G
R
G
A
Y
G
V
V
E
K
M
R
H
V
P
S
G
Q
I
M
A
V
K
R
I
R
---
N
S
Q
E
Q
K
R
L
L
M
D
L
D
I
S
M
R
T
V
D
C
P
F
T
V
T
F
Y
G
A
L
F
R
E
G
D
V
W
I
C
M
E
L
M
D
T
S
L
D
K
F
Y
K
Q
V
I
D
K
G
Q
T
I
P
E
D
I
L
G
K
I
A
V
S
I
V
K
A
L
E
H
L
H
S
K
L
S
V
I
H
R
D
V
K
P
S
N
V
L
I
N
A
L
G
Q
V
K
M
C
D
F
---------------
A
G
C
K
P
Y
M
A
P
E
R
I
N
P
E
L
N
Q
--
Y
S
V
K
S
D
I
W
S
L
G
I
T
M
I
E
L
A
I
L
R
F
P
Y
D
S
W
G
T
P
F
Q
Q
L
K
Q
V
V
E
E
P
S
P
Q
L
P
A
D
K
F
S
A
E
F
V
D
F
T
S
Q
C
L
K
K
N
S
K
E
R
P
T
Y
P
E
L
M
Q
H
P
F
F
T
L
H
E
S
K
G
T
D
V
A
S
F
V
K
L
I
L
G
-