@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK2_HUMAN: (2020-09-18 )
MRWVWALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSIDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS

Atome Classification :

(58 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PV2_A_3(4MPC)
PDK2_HUMAN
[Raw transfer]




7FW_A_2(5M4M)
PDK2_HUMAN
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




7FE_A_2(5M4P)
PDK2_HUMAN
[Raw transfer]




PV0_A_2(4MPN)
PDK2_HUMAN
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




PV8_A_2(4MPE)
PDK2_HUMAN
[Raw transfer]




PFT_A_2(4MP7)
PDK2_HUMAN
[Raw transfer]




SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]




P46_A_2(5J6A)
PDK2_HUMAN
[Raw transfer]




7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]




PV1_A_2(4MP2)
PDK2_HUMAN
[Raw transfer]




7F9_A_3(5M4K)
PDK2_HUMAN
[Raw transfer]




7FV_A_2(5M4N)
PDK2_HUMAN
[Raw transfer]




RDC_A_5(2Q8I)
PDK3_HUMAN
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




P4A_B_4(2ZDX)
PDK4_HUMAN
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]




ATP_A_2(2BU2)
PDK2_HUMAN
[Raw transfer]




ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]




P4A_A_3(2ZDX)
PDK4_HUMAN
[Raw transfer]




ADP_A_2(2BU8)
PDK2_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ANP_B_6(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_A_4(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_B_7(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_B_7(2ZDY)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_4(2ZDY)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_7(1Y8O)
PDK3_HUMAN
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_7(1Y8O)
PDK3_HUMAN
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




ANP_A_5(4E01)
BCKD_RAT
[Raw transfer]




ADP_A_2(3TZ5)
BCKD_RAT
[Raw transfer]




ADP_A_2(3TZ4)
BCKD_RAT
[Raw transfer]




ANP_A_2(4E02)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H7Q)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H85)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H81)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




ADP_A_2(4DZY)
BCKD_RAT
[Raw transfer]




ADP_A_2(4E00)
BCKD_RAT
[Raw transfer]




ADP_A_2(3VAD)
BCKD_RAT
[Raw transfer]




SAP_A_9(1GJV)
BCKD_RAT
[Raw transfer]




21 Blastp_CBE 98.5998%-128 - C9 -3CRL 5.5 PDK2_RAT
16 PsiBlast_PDB 97.4597%-126 - C9 -3CRL 5.5 PDK2_RAT
15 PsiBlast_PDB 94.7697%-123 - C9 -3CRK - PDK2_RAT -
24 Blastp_CBE 94.6899%-125 - C9 -2BU8 4.6 PDK2_HUMAN
7 PsiBlast_PDB 94.25100%-119 - C9 -4MP2 3.7 PDK2_HUMAN
8 PsiBlast_PDB 93.40100%-118 - C9 -4MP7 4.3 PDK2_HUMAN
10 PsiBlast_PDB 93.10100%-115 - C9 -4MPE 4.4 PDK2_HUMAN
11 PsiBlast_PDB 93.04100%-118 - C9 -4MPN 4.5 PDK2_HUMAN
17 PsiBlast_PDB 92.9699%-123 - C9 -2BTZ - PDK2_HUMAN -
9 PsiBlast_PDB 92.91100%-117 - C9 -4MPC 4.2 PDK2_HUMAN
25 Blastp_CBE 92.7599%-119 - C9 -2BU7 - PDK2_HUMAN -
18 PsiBlast_PDB 92.3899%-123 - C9 -2BU2 5.6 PDK2_HUMAN
20 PsiBlast_PDB 91.1699%-122 - C9 -2BU6 - PDK2_HUMAN -
14 PsiBlast_PDB 91.1097%-132 - C9 -1JM6 6.4 PDK2_RAT
1 PsiBlast_PDB 91.0599%-124 - C9 -4V26 7.3 PDK2_HUMAN
23 Blastp_CBE 90.9598%-130 - C9 -1JM6 6.8 PDK2_RAT
19 PsiBlast_PDB 90.8099%-120 - C9 -2BU5 - PDK2_HUMAN -
13 PsiBlast_PDB 90.39100%-125 - C9 -5J71 6.0 PDK2_HUMAN
63 Fugue 90.3596%-130 - C9 -1JM6 5.3 PDK2_RAT
12 PsiBlast_PDB 90.32100%-128 - C9 -5J6A 5.5 PDK2_HUMAN
79 HHSearch 90.1195% -60 - C9 -3CRL 5.5 PDK2_RAT
37 Blastp_CBE 87.4266%-118 - C9 -3D2R 7.9 PDK4_HUMAN
41 Blastp_CBE 87.0467%-127 - C9 -2ZDY 5.9 PDK4_HUMAN
45 Blastp_CBE 86.6367%-122 - C9 -2E0A 8.3 PDK4_HUMAN
46 Blastp_CBE 86.2467%-117 - C9 -2E0A 9.1 PDK4_HUMAN
34 Blastp_CBE 86.2067% -86 - C9 -1Y8P 8.0 PDK3_HUMAN
40 Blastp_CBE 86.0866%-128 - C9 -2ZKJ 7.6 PDK4_HUMAN
39 Blastp_CBE 85.9566%-110 - C9 -2ZKJ 8.0 PDK4_HUMAN
38 Blastp_CBE 85.9366%-130 - C9 -3D2R 7.6 PDK4_HUMAN
42 Blastp_CBE 85.4167%-113 - C9 -2ZDY 7.0 PDK4_HUMAN
35 Blastp_CBE 84.1167% -86 - C9 -1Y8O 5.1 PDK3_HUMAN
43 Blastp_CBE 82.9567%-122 - C9 -2ZDX 4.8 PDK4_HUMAN
44 Blastp_CBE 82.9367%-131 - C9 -2ZDX 4.5 PDK4_HUMAN
29 Blastp_CBE 82.7167% -86 - C9 -2Q8I 5.8 PDK3_HUMAN
6 PsiBlast_PDB 79.4599% -9 - C9 -5M4P 7.8 PDK2_HUMAN
83 HHSearch 78.2866% -27 - C9 -1Y8P 8.0 PDK3_HUMAN
4 PsiBlast_PDB 77.8099% -5 - C9 -5M4M 4.9 PDK2_HUMAN
2 PsiBlast_PDB 77.6099% -7 - C9 -4V25 6.4 PDK2_HUMAN
87 HHSearch 76.8864% -46 - C9 -3D2R 7.9 PDK4_HUMAN
5 PsiBlast_PDB 76.4899% -11 - C9 -5M4N 5.8 PDK2_HUMAN
3 PsiBlast_PDB 76.1299% -6 - C9 -5M4K 4.1 PDK2_HUMAN
84 HHSearch 75.8766% -28 - C9 -1Y8O 5.1 PDK3_HUMAN
80 HHSearch 75.6589% -37 - C9 -5J71 6.0 PDK2_HUMAN
86 HHSearch 75.3465% -45 - C9 -2E0A 9.1 PDK4_HUMAN
88 HHSearch 74.5064% -47 - C9 -3D2R 7.6 PDK4_HUMAN
53 Blastp_CBE 55.2833% -41 - C9 -4E02 6.6 BCKD_RAT
49 Blastp_CBE 55.2633% -36 - C9 -1GJV 5.4 BCKD_RAT
58 Blastp_CBE 55.2533% -38 - C9 -3TZ4 5.5 BCKD_RAT
47 Blastp_CBE 55.2033% -31 - C9 -1GKZ 4.6 BCKD_RAT
57 Blastp_CBE 55.1533% -41 - C9 -3TZ5 6.4 BCKD_RAT
54 Blastp_CBE 55.0133% -38 - C9 -4E01 6.7 BCKD_RAT
50 Blastp_CBE 54.8633% -38 - C9 -4H85 5.9 BCKD_RAT
61 Blastp_CBE 54.8232% -44 - C9 -3VAD 5.9 BCKD_RAT
51 Blastp_CBE 54.8133% -42 - C9 -4H81 5.9 BCKD_RAT
52 Blastp_CBE 54.7933% -37 - C9 -4H7Q 5.5 BCKD_RAT
56 Blastp_CBE 54.6533% -39 - C9 -4DZY 6.0 BCKD_RAT
55 Blastp_CBE 54.4833% -39 - C9 -4E00 5.6 BCKD_RAT
64 Fugue 51.4431% 18 - C9 -1GKZ 4.4 BCKD_RAT