@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK3_HUMAN: (2020-09-18 )
MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

7FW_A_2(5M4M)
PDK2_HUMAN
[Raw transfer]




PV2_A_3(4MPC)
PDK2_HUMAN
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




PV8_A_2(4MPE)
PDK2_HUMAN
[Raw transfer]




PFT_A_2(4MP7)
PDK2_HUMAN
[Raw transfer]




PV0_A_2(4MPN)
PDK2_HUMAN
[Raw transfer]




SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]




7FE_A_2(5M4P)
PDK2_HUMAN
[Raw transfer]




P46_A_2(5J6A)
PDK2_HUMAN
[Raw transfer]




7F9_A_3(5M4K)
PDK2_HUMAN
[Raw transfer]




7FV_A_2(5M4N)
PDK2_HUMAN
[Raw transfer]




7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]




PV1_A_2(4MP2)
PDK2_HUMAN
[Raw transfer]




RDC_A_5(2Q8I)
PDK3_HUMAN
[Raw transfer]




P4A_A_3(2ZDX)
PDK4_HUMAN
[Raw transfer]




P4A_B_4(2ZDX)
PDK4_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_B_7(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_A_7(1Y8O)
PDK3_HUMAN
[Raw transfer]




ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_7(1Y8O)
PDK3_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ADP_A_4(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_B_7(2ZDY)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ANP_B_6(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ATP_A_2(2BU2)
PDK2_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_4(2ZDY)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_2(2BU8)
PDK2_HUMAN
[Raw transfer]




ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




3 PsiBlast_PDB 97.53100%-115 - C10 -1Y8P 8.1 PDK3_HUMAN
22 Blastp_CBE 95.58100%-110 - C10 -2PNR - PDK3_HUMAN -
1 PsiBlast_PDB 95.30100%-114 - C10 -1Y8N - PDK3_HUMAN -
2 PsiBlast_PDB 95.20100%-115 - C10 -1Y8O 5.1 PDK3_HUMAN
5 PsiBlast_PDB 94.63100%-110 - C10 -2PNR - PDK3_HUMAN -
4 PsiBlast_PDB 94.48100%-118 - C10 -2Q8I 5.7 PDK3_HUMAN
87 HHSearch 88.3997% -43 - C10 -1Y8P 8.1 PDK3_HUMAN
7 PsiBlast_PDB 86.7168%-116 - C10 -2Q8G - PDK1_HUMAN -
8 PsiBlast_PDB 86.4968%-120 - C10 -2Q8H - PDK1_HUMAN -
86 HHSearch 86.2097% -36 - C10 -2PNR - PDK3_HUMAN -
88 HHSearch 86.1297% -40 - C10 -1Y8O 5.1 PDK3_HUMAN
6 PsiBlast_PDB 86.0668%-116 - C10 -2Q8F - PDK1_HUMAN -
21 Blastp_CBE 85.43100%-108 - C10 -2PNR - PDK3_HUMAN -
23 Blastp_CBE 85.36100%-110 - C10 -2PNR - PDK3_HUMAN -
43 Blastp_CBE 85.1364%-125 - C10 -3D2R 7.7 PDK4_HUMAN
13 PsiBlast_PDB 84.6368%-116 - C10 -4MP2 4.0 PDK2_HUMAN
44 Blastp_CBE 84.5864%-115 - C10 -2ZKJ 8.0 PDK4_HUMAN
14 PsiBlast_PDB 84.3768%-115 - C10 -4MP7 4.5 PDK2_HUMAN
35 Blastp_CBE 84.3668%-122 - C10 -2BU2 5.6 PDK2_HUMAN
31 Blastp_CBE 84.3268%-123 - C10 -2BU8 4.6 PDK2_HUMAN
17 PsiBlast_PDB 83.9468%-115 - C10 -4MPN 4.8 PDK2_HUMAN
41 Blastp_CBE 83.9264%-113 - C10 -2E0A 9.1 PDK4_HUMAN
45 Blastp_CBE 83.9164%-123 - C10 -2ZKJ 7.6 PDK4_HUMAN
42 Blastp_CBE 83.8864%-114 - C10 -3D2R 7.9 PDK4_HUMAN
15 PsiBlast_PDB 83.8268%-114 - C10 -4MPC 4.5 PDK2_HUMAN
36 Blastp_CBE 83.7064%-124 - C10 -2ZDY 5.8 PDK4_HUMAN
16 PsiBlast_PDB 83.0568%-113 - C10 -4MPE 4.6 PDK2_HUMAN
40 Blastp_CBE 82.4464%-118 - C10 -2E0A 8.4 PDK4_HUMAN
27 Blastp_CBE 82.2768%-120 - C10 -5M4P 7.4 PDK2_HUMAN
37 Blastp_CBE 81.9664%-108 - C10 -2ZDY 7.0 PDK4_HUMAN
29 Blastp_CBE 81.9168%-121 - C10 -5M4M 4.7 PDK2_HUMAN
20 PsiBlast_PDB 81.2567%-119 - C10 -4V25 4.8 PDK2_HUMAN
70 Fugue 81.1469%-125 - C10 -1JM6 6.3 PDK2_RAT
89 HHSearch 81.0066% -52 - C10 -3CRL 5.6 PDK2_RAT
38 Blastp_CBE 80.8264%-117 - C10 -2ZDX 4.7 PDK4_HUMAN
92 HHSearch 80.4166%-119 * C10 *5J71 5.5 PDK2_HUMAN
30 Blastp_CBE 80.3368%-124 - C10 -5M4K 4.1 PDK2_HUMAN
19 PsiBlast_PDB 80.2968%-122 - C10 -5J71 5.5 PDK2_HUMAN
28 Blastp_CBE 79.8668%-121 - C10 -5M4N 6.0 PDK2_HUMAN
39 Blastp_CBE 79.7264%-124 - C10 -2ZDX 4.9 PDK4_HUMAN
18 PsiBlast_PDB 79.6168%-124 - C10 -5J6A 4.5 PDK2_HUMAN
97 HHSearch 79.4263% -70 - C10 -3D2R 7.9 PDK4_HUMAN
24 Blastp_CBE 79.2167% -30 - C10 -3CRL 5.6 PDK2_RAT
98 HHSearch 78.4363% -72 - C10 -3D2R 7.6 PDK4_HUMAN
11 PsiBlast_PDB 77.8667% -27 - C10 -3CRL 5.5 PDK2_RAT
93 HHSearch 77.8063% -65 - C10 -2E0A 9.1 PDK4_HUMAN
9 PsiBlast_PDB 71.4167% -39 - C10 -1JM6 6.4 PDK2_RAT
26 Blastp_CBE 70.9767% -43 - C10 -1JM6 6.7 PDK2_RAT
12 PsiBlast_PDB 66.3166% 23 - C10 -4V26 6.3 PDK2_HUMAN
71 Fugue 48.6031% 15 - C10 -1GKZ 4.5 BCKD_RAT