@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : VRK2_HUMAN: (2020-09-24 )
MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKISYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESSTGLWPTISQFTLSEETNADVYYYRIIIPVLLMLVFLALFFL

Atome Classification :

(75 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_15(5X17)
KC1D_MOUSE
[Raw transfer]




KJD_B_5(6NCG)
VRK2_HUMAN
[Raw transfer]




E5M_D_13(6BRU)
VRK1_HUMAN
[Raw transfer]




EA7_D_15(6CFM)
VRK1_HUMAN
[Raw transfer]




E5M_B_7(6BRU)
VRK1_HUMAN
[Raw transfer]




E8V_A_5(6BU6)
VRK1_HUMAN
[Raw transfer]




G6J_B_13(6DD4)
VRK1_HUMAN
[Raw transfer]




F87_B_10(6CNX)
VRK1_HUMAN
[Raw transfer]




F8Y_A_5(6CQH)
VRK1_HUMAN
[Raw transfer]




E8D_A_7(6BTW)
VRK1_HUMAN
[Raw transfer]




E8D_D_19(6BTW)
VRK1_HUMAN
[Raw transfer]




F7D_B_7(6CMM)
VRK1_HUMAN
[Raw transfer]




KJD_A_3(6NCG)
VRK2_HUMAN
[Raw transfer]




E8D_B_11(6BTW)
VRK1_HUMAN
[Raw transfer]




EA7_A_6(6CFM)
VRK1_HUMAN
[Raw transfer]




E1D_B_10(6BP0)
VRK1_HUMAN
[Raw transfer]




F87_A_5(6CNX)
VRK1_HUMAN
[Raw transfer]




G6J_D_25(6DD4)
VRK1_HUMAN
[Raw transfer]




E1D_D_20(6BP0)
VRK1_HUMAN
[Raw transfer]




7DZ_D_19(5UVF)
VRK1_HUMAN
[Raw transfer]




KWJ_A_5(6NPN)
VRK1_HUMAN
[Raw transfer]




7DZ_A_5(5UVF)
VRK1_HUMAN
[Raw transfer]




F8Y_B_10(6CQH)
VRK1_HUMAN
[Raw transfer]




7DZ_C_11(5UVF)
VRK1_HUMAN
[Raw transfer]




7DZ_A_2(5UU1)
VRK2_HUMAN
[Raw transfer]




KWJ_C_18(6NPN)
VRK1_HUMAN
[Raw transfer]




7DZ_A_2(5UU1)
VRK2_HUMAN
[Raw transfer]




7DZ_A_5(5UVF)
VRK1_HUMAN
[Raw transfer]




EA7_B_10(6CFM)
VRK1_HUMAN
[Raw transfer]




KWJ_D_25(6NPN)
VRK1_HUMAN
[Raw transfer]




KWJ_B_8(6NPN)
VRK1_HUMAN
[Raw transfer]




REB_B_8(3OP5)
VRK1_HUMAN
[Raw transfer]




8E1_A_5(5UKF)
VRK1_HUMAN
[Raw transfer]




REB_A_5(3OP5)
VRK1_HUMAN
[Raw transfer]




8E1_C_14(5UKF)
VRK1_HUMAN
[Raw transfer]




7DZ_B_9(5UVF)
VRK1_HUMAN
[Raw transfer]




REB_C_11(3OP5)
VRK1_HUMAN
[Raw transfer]




REB_D_15(3OP5)
VRK1_HUMAN
[Raw transfer]




1QO_B_8(4KB8)
KC1D_HUMAN
[Raw transfer]




ADP_B_15(5X17)
KC1D_MOUSE
[Raw transfer]




1QO_D_14(4KB8)
KC1D_HUMAN
[Raw transfer]




8E1_D_19(5UKF)
VRK1_HUMAN
[Raw transfer]




ANP_A_5(6AC9)
VRK1_HUMAN
[Raw transfer]




8E1_B_8(5UKF)
VRK1_HUMAN
[Raw transfer]




37J_A_9(4TWC)
KC1D_HUMAN
[Raw transfer]




386_A_12(4TW9)
KC1D_HUMAN
[Raw transfer]




37J_B_18(4TWC)
KC1D_HUMAN
[Raw transfer]




9WG_C_16(5W4W)
KC1D_HUMAN
[Raw transfer]




0CK_B_8(3UYT)
KC1D_HUMAN
[Raw transfer]




AUE_A_3(5IH5)
KC1D_HUMAN
[Raw transfer]




1QM_B_8(4KBA)
KC1D_HUMAN
[Raw transfer]




15G_B_4(4HGT)
KC1D_HUMAN
[Raw transfer]




1QG_C_14(4KBK)
KC1D_HUMAN
[Raw transfer]




GEW_B_5(6HMP)
KC1D_HUMAN
[Raw transfer]




AUG_A_6(5IH6)
KC1D_HUMAN
[Raw transfer]




GEW_A_3(6HMP)
KC1D_HUMAN
[Raw transfer]




1QN_C_11(4KB8)
KC1D_HUMAN
[Raw transfer]




1QN_A_5(4KB8)
KC1D_HUMAN
[Raw transfer]




1QG_A_5(4KBK)
KC1D_HUMAN
[Raw transfer]




15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]




16W_B_4(4HNF)
KC1D_HUMAN
[Raw transfer]




1QM_C_11(4KBA)
KC1D_HUMAN
[Raw transfer]




16W_A_3(4HNF)
KC1D_HUMAN
[Raw transfer]




0CK_D_13(3UYT)
KC1D_HUMAN
[Raw transfer]




1QJ_B_7(4KBC)
KC1D_HUMAN
[Raw transfer]




16W_A_3(4HNI)
KC1E_HUMAN
[Raw transfer]




GE5_A_3(6HMR)
KC1D_HUMAN
[Raw transfer]




0CK_A_5(3UYT)
KC1D_HUMAN
[Raw transfer]




HSJ_A_13(4TW9)
KC1D_HUMAN
[Raw transfer]




184 HHSearch 90.15100%-104 - C2 -5UU1 8.7 VRK2_HUMAN
1 PsiBlast_PDB 89.9499%-104 - C2 -5UU1 8.7 VRK2_HUMAN
185 HHSearch 89.69100%-112 - C2 -2V62 - VRK2_HUMAN -
3 PsiBlast_PDB 89.4999%-112 - C2 -2V62 - VRK2_HUMAN -
22 Blastp_CBE 89.2899%-109 - C2 -2V62 - VRK2_HUMAN -
2 PsiBlast_PDB 88.3599%-118 - C2 -6NCG 5.6 VRK2_HUMAN
21 Blastp_CBE 82.9199%-117 - C2 -6NCG 5.9 VRK2_HUMAN
60 Blastp_CBE 68.6056% -67 - C2 -3OP5 6.0 VRK1_HUMAN
65 Blastp_CBE 67.7856% -14 - C2 -5UKF 6.1 VRK1_HUMAN
13 PsiBlast_PDB 67.7655% -9 - C2 -6BU6 6.5 VRK1_HUMAN
17 PsiBlast_PDB 66.8855% -10 - C2 -6CNX 8.6 VRK1_HUMAN
57 Blastp_CBE 66.8056% -71 - C2 -5UVF 6.8 VRK1_HUMAN
58 Blastp_CBE 66.7556% -12 - C2 -5UVF 6.4 VRK1_HUMAN
11 PsiBlast_PDB 66.6355% -7 - C2 -6BRU - VRK1_HUMAN -
61 Blastp_CBE 66.5556% -10 - C2 -3OP5 6.1 VRK1_HUMAN
34 Blastp_CBE 66.3256% -16 - C2 -6CQH 7.5 VRK1_HUMAN
8 PsiBlast_PDB 66.1655% -11 - C2 -3OP5 6.4 VRK1_HUMAN
68 Blastp_CBE 66.1456% -10 - C2 -6AC9 - VRK1_HUMAN -
30 Blastp_CBE 66.0156% -10 - C2 -6CSW - VRK1_HUMAN -
20 PsiBlast_PDB 65.9955% -9 - C2 -6NPN 7.2 VRK1_HUMAN
9 PsiBlast_PDB 65.9855% -12 - C2 -5UVF 6.5 VRK1_HUMAN
12 PsiBlast_PDB 65.8355% -11 - C2 -6BTW 6.6 VRK1_HUMAN
16 PsiBlast_PDB 65.5955% -13 - C2 -6CQH 7.5 VRK1_HUMAN
14 PsiBlast_PDB 65.5955% -8 - C2 -6CFM 6.5 VRK1_HUMAN
69 Blastp_CBE 65.3856% -9 - C2 -6AC9 3.4 VRK1_HUMAN
24 Blastp_CBE 65.0156% -8 - C2 -6NPN 6.1 VRK1_HUMAN
63 Blastp_CBE 64.9556% -10 - C2 -5UKF 5.4 VRK1_HUMAN
56 Blastp_CBE 64.5656% -65 - C2 -5UVF 6.7 VRK1_HUMAN
37 Blastp_CBE 64.3956% -14 - C2 -6CNX 7.8 VRK1_HUMAN
53 Blastp_CBE 64.2656% -6 - C2 -6BP0 7.4 VRK1_HUMAN
40 Blastp_CBE 64.2356% -20 - C2 -6CMM 7.5 VRK1_HUMAN
41 Blastp_CBE 64.2256% -9 - C2 -6CFM 6.8 VRK1_HUMAN
47 Blastp_CBE 64.0756% -13 - C2 -6BTW 7.1 VRK1_HUMAN
28 Blastp_CBE 63.7556% -5 - C2 -6DD4 7.6 VRK1_HUMAN
50 Blastp_CBE 63.7456% -9 - C2 -6BRU 6.8 VRK1_HUMAN
23 Blastp_CBE 63.3056% -9 - C2 -6NPN 7.1 VRK1_HUMAN
26 Blastp_CBE 62.7356% 0 - C2 -6DD4 8.0 VRK1_HUMAN
188 HHSearch 62.7056% 7 - C2 -5UVF 6.5 VRK1_HUMAN
55 Blastp_CBE 62.6956% -5 - C2 -6BP0 7.3 VRK1_HUMAN
49 Blastp_CBE 61.5156% -11 - C2 -6BTW 6.8 VRK1_HUMAN
52 Blastp_CBE 61.4956% -6 - C2 -6BRU 6.7 VRK1_HUMAN
25 Blastp_CBE 61.2156% 2 - C2 -6NPN 6.1 VRK1_HUMAN
59 Blastp_CBE 60.7756% -3 - C2 -3OP5 5.4 VRK1_HUMAN
43 Blastp_CBE 60.6256% -1 - C2 -6CFM 5.2 VRK1_HUMAN
62 Blastp_CBE 59.8156% -68 - C2 -5UKF 3.9 VRK1_HUMAN
64 Blastp_CBE 58.0256% -58 - C2 -5UKF 4.4 VRK1_HUMAN
136 Blastp_CBE 52.8434% -37 - C2 -5W4W 7.1 KC1D_HUMAN
122 Blastp_CBE 51.7734% -38 - C2 -5X17 Error KC1D_MOUSE
132 Blastp_CBE 51.1734% -35 - C2 -4TWC 5.8 KC1D_HUMAN
134 Blastp_CBE 51.0834% -40 - C2 -4TW9 5.9 KC1D_HUMAN
133 Blastp_CBE 50.9834% -30 - C2 -4TW9 2.6 KC1D_HUMAN
121 Blastp_CBE 50.9834% -37 - C2 -5X17 5.7 KC1D_MOUSE
131 Blastp_CBE 50.8934% -34 - C2 -4TWC 5.5 KC1D_HUMAN
149 Blastp_CBE 50.5534% -36 - C2 -4KB8 6.2 KC1D_HUMAN
110 Blastp_CBE 50.4534% -43 - C2 -4HGT 6.9 KC1D_HUMAN
148 Blastp_CBE 50.3934% -39 - C2 -4KB8 6.9 KC1D_HUMAN
140 Blastp_CBE 50.3234% -42 - C2 -4KBK 7.0 KC1D_HUMAN
145 Blastp_CBE 50.3034% -36 - C2 -4KBA 7.8 KC1D_HUMAN
73 Blastp_CBE 50.2534% -36 - C2 -6HMR 8.0 KC1D_HUMAN
116 Blastp_CBE 49.9534% -36 - C2 -3UYT 7.5 KC1D_HUMAN
107 Blastp_CBE 49.8934% -39 - C2 -4HNF 7.7 KC1D_HUMAN
75 Blastp_CBE 49.8934% -31 - C2 -6HMP 8.5 KC1D_HUMAN
108 Blastp_CBE 49.7134% -32 - C2 -4HNF 6.6 KC1D_HUMAN
115 Blastp_CBE 49.7034% -33 - C2 -3UYT 7.1 KC1D_HUMAN
105 Blastp_CBE 49.4934% -35 - C2 -5IH5 5.2 KC1D_HUMAN
144 Blastp_CBE 49.3734% -37 - C2 -4KBA 7.6 KC1D_HUMAN
104 Blastp_CBE 49.1834% -32 - C2 -5IH6 5.7 KC1D_HUMAN
74 Blastp_CBE 49.1534% -43 - C2 -6HMP 8.6 KC1D_HUMAN
142 Blastp_CBE 48.9434% -35 - C2 -4KBK 6.6 KC1D_HUMAN
113 Blastp_CBE 48.8934% -43 - C2 -3UYT 7.7 KC1D_HUMAN
109 Blastp_CBE 48.6634% -42 - C2 -4HGT 6.4 KC1D_HUMAN
150 Blastp_CBE 48.4834% -44 - C2 -4KB8 7.0 KC1D_HUMAN
103 Blastp_CBE 48.2834% -34 - C2 -4HNI 6.2 KC1E_HUMAN
125 Blastp_CBE 48.0134% -36 - C2 -4KBC 6.5 KC1D_HUMAN
147 Blastp_CBE 47.6634% -39 - C2 -4KB8 5.9 KC1D_HUMAN