@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GRK6_HUMAN: (2019-05-21 )
MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPDDKRKACGRQLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQDCCGNCSDSEEELPTRL

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



AMP_B_13(3NYO)
GRK6_HUMAN
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



ANP_A_2(4TND)
GRK5_HUMAN
[Raw transfer]



AMP_B_13(3NYO)
GRK6_HUMAN
[Raw transfer]



ANP_A_2(4TND)
GRK5_HUMAN
[Raw transfer]



AMP_A_3(3NYO)
GRK6_HUMAN
[Raw transfer]



ANP_B_8(2ACX)
GRK6_HUMAN
[Raw transfer]



AN2_B_4(4YHJ)
GRK4_HUMAN
[Raw transfer]



SGV_B_12(3NYN)
GRK6_HUMAN
[Raw transfer]



453_A_2(4WNK)
GRK5_BOVIN
[Raw transfer]



SGV_A_3(3NYN)
GRK6_HUMAN
[Raw transfer]



AN2_A_3(4YHJ)
GRK4_HUMAN
[Raw transfer]



SGV_A_2(4TNB)
GRK5_HUMAN
[Raw transfer]
22 Blastp_CBE 98.77100%-112 - C1 -3NYN 4.9 GRK6_HUMAN
1 PsiBlast_PDB 98.25100%-107 - C1 -3NYN 4.6 GRK6_HUMAN
2 PsiBlast_PDB 97.87100%-109 - C1 -3NYO 4.5 GRK6_HUMAN
27 HHSearch 97.31100%-109 - C1 -3NYO 4.7 GRK6_HUMAN
21 Blastp_CBE 97.31100%-109 - C1 -3NYO 4.7 GRK6_HUMAN
3 PsiBlast_PDB 90.7599%-117 - C1 -2ACX 4.7 GRK6_HUMAN
51 Fugue 90.6398%-117 - C1 -2ACX 4.7 GRK6_HUMAN
23 Blastp_CBE 89.7799%-115 - C1 -2ACX 4.5 GRK6_HUMAN
5 PsiBlast_PDB 85.1372% -96 - C1 -4TNB 4.9 GRK5_HUMAN
4 PsiBlast_PDB 84.6772%-112 - C1 -4WNK 9.2 GRK5_BOVIN
6 PsiBlast_PDB 84.5172% -93 - C1 -4TND 4.8 GRK5_HUMAN
25 HHSearch 72.4971% -20 - C1 -4TND 4.8 GRK5_HUMAN
7 PsiBlast_PDB 72.1366% -31 - C1 -4YHJ 6.1 GRK4_HUMAN
24 Blastp_CBE 70.3567% -29 - C1 -4YHJ 5.6 GRK4_HUMAN