@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHA3_HUMAN: (2019-04-28 )
MDCQLSILLLLSCSVLDSFGELIPQPSNEVNLLDSKTIQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDPPRMYCSTEGEWLVPIGKCSCNAGYEERGFMCQACRPGFYKALDGNMKCAKCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAVNGVSELSSPPRQFAAVSITTNQAAPSPVLTIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKQEQETSYTILRARGTNVTISSLKPDTIYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGESSQVVMIAISAAVAIILLTVVIYVLIGRFCGYKSKHGADEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLNGVWTAHCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV

Atome Classification :

(11 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

Q7M_A_2(4P5Z)

[Raw transfer]



ANP_A_4(2QO7)

[Raw transfer]



B96_A_2(4TWN)

[Raw transfer]



C07_A_2(4G2F)

[Raw transfer]



25Q_A_2(4P4C)

[Raw transfer]



ANP_A_4(3FXX)

[Raw transfer]



IFC_A_2(3DZQ)

[Raw transfer]



37W_A_2(4TWO)

[Raw transfer]



ANP_A_5(2QOC)

[Raw transfer]



ANP_A_3(2QO9)

[Raw transfer]



ANP_A_3(2QOQ)

[Raw transfer]
5 PsiBlast_PDB 79.8399%-130 - C1 -3FXX 4.6
11 PsiBlast_PDB 70.3999%-129 - C1 -2QOC 5.2
9 PsiBlast_PDB 60.5599%-127 - C1 -2QOQ 4.3
13 PsiBlast_PDB 57.5899%-133 - C1 -4G2F 5.7
2 PsiBlast_PDB 54.0599%-130 - C1 -2QO9 4.3
8 PsiBlast_PDB 53.9899%-127 - C1 -2QO7 4.9
20 PsiBlast_PDB 51.8799%-128 - C1 -4TWO 6.0
19 PsiBlast_PDB 46.9399%-136 - C1 -4TWN 11.9
18 PsiBlast_PDB 38.2399%-140 * C1 *4P5Z 9.9
17 PsiBlast_PDB 28.7899%-134 - C1 -4P4C 6.0
12 PsiBlast_PDB 25.6699%-135 - C1 -3DZQ 10.7