@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KCC2A_HUMAN: (2019-04-30 )
MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSGGKSGGNKKSDGVKESSESTNTTIEDEDTKVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHRSGAPSVLPH

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




9EJ_B_5(5VLO)
KCC2D_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




C2V_B_6(6AYW)
KCC2D_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




9EJ_A_3(5VLO)
KCC2D_HUMAN
[Raw transfer]




D0S_C_9(6BAB)
KCC2D_MOUSE
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




D0S_A_5(6BAB)
KCC2D_MOUSE
[Raw transfer]




C2V_A_3(6AYW)
KCC2D_HUMAN
[Raw transfer]




D0S_B_7(6BAB)
KCC2D_MOUSE
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




2 PsiBlast_PDB 84.3293% -96 - C1 -3SOA 4.8 KCC2A_HUMAN
3 PsiBlast_PDB 66.8290%-131 - C1 -2WEL 6.0 KCC2D_HUMAN
9 PsiBlast_PDB 66.3792%-119 - C1 -2VN9 7.1 KCC2D_HUMAN
26 Blastp_CBE 65.4093%-119 - C1 -2VN9 7.1 KCC2D_HUMAN
10 PsiBlast_PDB 64.7890%-125 - C1 -3BHH 6.1 KCC2B_HUMAN
7 PsiBlast_PDB 64.7292%-119 - C1 -6AYW 7.7 KCC2D_HUMAN
24 Blastp_CBE 63.7892%-118 - C1 -6AYW 7.8 KCC2D_HUMAN
6 PsiBlast_PDB 63.6392%-116 - C1 -5VLO 8.7 KCC2D_HUMAN
25 Blastp_CBE 63.2692%-114 - C1 -5VLO 9.9 KCC2D_HUMAN
8 PsiBlast_PDB 61.8392%-112 - C1 -6BAB 9.8 KCC2D_MOUSE
23 Blastp_CBE 61.6492%-114 * C1 *6BAB 8.7 KCC2D_MOUSE
22 Blastp_CBE 61.3992%-114 - C1 -6BAB 9.7 KCC2D_MOUSE