@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KCC2G_HUMAN: (2019-04-30 )
MATTATCTRFTDDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVSRNFSAAKSLLNKKSDGGVKKRKSSSSVHLMPQSNNKNSLVSPAQEPAPLQTAMEPQTTVVHNATDGIKGSTESCNTTTEDEDLKARSPEGRSSRDRTAPSAGMQPQPSLCSSAMRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGKWLNVHYHCSGAPAAPLQ

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

9EJ_B_5(5VLO)
KCC2D_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




9EJ_A_3(5VLO)
KCC2D_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




C2V_B_6(6AYW)
KCC2D_HUMAN
[Raw transfer]




D0S_B_7(6BAB)
KCC2D_MOUSE
[Raw transfer]




D0S_C_9(6BAB)
KCC2D_MOUSE
[Raw transfer]




C2V_A_3(6AYW)
KCC2D_HUMAN
[Raw transfer]




D0S_A_5(6BAB)
KCC2D_MOUSE
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




2 PsiBlast_PDB 74.6899%-116 - C1 -2V7O 6.7 KCC2G_HUMAN
5 PsiBlast_PDB 73.1292%-117 - C1 -2VN9 7.1 KCC2D_HUMAN
21 Blastp_CBE 72.4992%-117 - C1 -2VN9 7.1 KCC2D_HUMAN
9 PsiBlast_PDB 71.6391%-122 - C1 -3BHH 6.1 KCC2B_HUMAN
26 Blastp_CBE 71.4692%-121 - C1 -3BHH 6.5 KCC2B_HUMAN
7 PsiBlast_PDB 70.9691%-117 - C1 -6AYW 7.7 KCC2D_HUMAN
24 Blastp_CBE 70.3692%-116 - C1 -6AYW 7.8 KCC2D_HUMAN
25 Blastp_CBE 70.2092%-112 - C1 -5VLO 9.9 KCC2D_HUMAN
6 PsiBlast_PDB 69.5691%-114 - C1 -5VLO 8.7 KCC2D_HUMAN
22 Blastp_CBE 67.7792%-112 - C1 -6BAB 9.7 KCC2D_MOUSE
23 Blastp_CBE 67.7692%-111 - C1 -6BAB 8.7 KCC2D_MOUSE
8 PsiBlast_PDB 67.6191%-110 - C1 -6BAB 9.8 KCC2D_MOUSE