@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK2_HUMAN: (2019-05-03 )
MRWVWALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSIDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(2BU2)
PDK2_HUMAN
[Raw transfer]



ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]



ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]



7F9_A_3(5M4K)
PDK2_HUMAN
[Raw transfer]



7FE_A_2(5M4P)
PDK2_HUMAN
[Raw transfer]



ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]



ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]



7FW_A_2(5M4M)
PDK2_HUMAN
[Raw transfer]



SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]



7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]



ADP_A_2(2BU8)
PDK2_HUMAN
[Raw transfer]



7FV_A_2(5M4N)
PDK2_HUMAN
[Raw transfer]



P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]



PV1_A_2(4MP2)
PDK2_HUMAN
[Raw transfer]
21 Blastp_CBE 95.2098%-128 - C1 -3CRL 5.5 PDK2_RAT
11 PsiBlast_PDB 88.5497%-126 - C1 -3CRL 5.5 PDK2_RAT
7 PsiBlast_PDB 73.57100%-119 - C1 -4MP2 3.7 PDK2_HUMAN
17 PsiBlast_PDB 73.3899%-125 - C1 -2BU8 4.6 PDK2_HUMAN
13 PsiBlast_PDB 60.0099%-123 - C1 -2BU2 5.6 PDK2_HUMAN
1 PsiBlast_PDB 52.6099%-124 - C1 -4V26 7.3 PDK2_HUMAN
9 PsiBlast_PDB 49.2697%-132 - C1 -1JM6 6.4 PDK2_RAT
8 PsiBlast_PDB 46.74100%-125 - C1 -5J71 6.0 PDK2_HUMAN
23 Blastp_CBE 46.0298%-130 - C1 -1JM6 6.8 PDK2_RAT
6 PsiBlast_PDB 40.3699% -9 - C1 -5M4P 7.8 PDK2_HUMAN
4 PsiBlast_PDB 33.7299% -5 - C1 -5M4M 4.9 PDK2_HUMAN
2 PsiBlast_PDB 30.7099% -7 - C1 -4V25 6.4 PDK2_HUMAN
3 PsiBlast_PDB 23.2199% -6 - C1 -5M4K 4.1 PDK2_HUMAN
5 PsiBlast_PDB 22.7399% -11 - C1 -5M4N 5.8 PDK2_HUMAN