@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PTK6_HUMAN: (2019-05-03 )
MVSRDQAHLGPKYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERETVESEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRLAAPCRKHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLRHKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGLARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTCWCRDPEQRPCFKALRERLSSFTSYENPT

Atome Classification :

(10 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_C_14(5D7V)
PTK6_HUMAN
[Raw transfer]




GOL_B_10(5D7V)
PTK6_HUMAN
[Raw transfer]




GOL_D_18(5D7V)
PTK6_HUMAN
[Raw transfer]




1N1_A_5(5H2U)
PTK6_HUMAN
[Raw transfer]




58V_A_4(5DA3)
PTK6_HUMAN
[Raw transfer]




FLJ_A_2(6CZ3)
PTK6_HUMAN
[Raw transfer]




FKY_A_2(6CZ4)
PTK6_HUMAN
[Raw transfer]




1N1_B_9(5H2U)
PTK6_HUMAN
[Raw transfer]




1N1_C_13(5H2U)
PTK6_HUMAN
[Raw transfer]




1N1_D_20(5H2U)
PTK6_HUMAN
[Raw transfer]




26 Blastp_CBE 46.9698%-138 - C1 -5H2U 7.2 PTK6_HUMAN
23 Blastp_CBE 45.8798%-133 - C1 -5D7V 2.6 PTK6_HUMAN
5 PsiBlast_PDB 44.6798%-134 - C1 -5H2U 7.6 PTK6_HUMAN
4 PsiBlast_PDB 44.5499%-134 - C1 -5DA3 7.2 PTK6_HUMAN
21 Blastp_CBE 44.0198%-131 * C1 *5D7V 2.3 PTK6_HUMAN
24 Blastp_CBE 43.7398%-137 - C1 -5H2U 7.2 PTK6_HUMAN
25 Blastp_CBE 43.6398%-135 - C1 -5H2U 7.3 PTK6_HUMAN
1 PsiBlast_PDB 43.6099%-120 - C1 -6CZ3 7.5 PTK6_HUMAN
22 Blastp_CBE 43.0798%-133 - C1 -5D7V 2.3 PTK6_HUMAN
2 PsiBlast_PDB 39.7499%-139 - C1 -6CZ4 10.6 PTK6_HUMAN