@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR2B1_RXRa: (2019-04-25 )
MDTKHFLPLDFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT

Atome Classification :

(92 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

K08_D_6(4N8R)
?
[Raw transfer]



K08_A_5(4N8R)
?
[Raw transfer]



K09_A_5(4N5G)
?
[Raw transfer]



2W0_A_3(4PP5)
RXRA_HUMAN
[Raw transfer]



HXA_E_5(1MV9)
RXRA_HUMAN
[Raw transfer]



5TN_A_3(2P1V)
RXRA_HUMAN
[Raw transfer]



3T2_A_3(4RME)
RXRA_HUMAN
[Raw transfer]



2VZ_A_3(4PP3)
RXRA_HUMAN
[Raw transfer]



2VP_A_3(4POJ)
RXRA_HUMAN
[Raw transfer]



3SW_A_3(4RMD)
RXRA_HUMAN
[Raw transfer]



4TN_A_3(2P1U)
RXRA_HUMAN
[Raw transfer]



9RA_A_3(4K6I)
?
[Raw transfer]



3TN_A_3(2P1T)
RXRA_HUMAN
[Raw transfer]



3SV_A_3(4RMC)
RXRA_HUMAN
[Raw transfer]



REA_I_9(1XDK)
RXRA_MOUSE
[Raw transfer]



7BE_A_3(5LYQ)
RXRA_HUMAN
[Raw transfer]



29V_A_3(4M8E)
RXRA_HUMAN
[Raw transfer]



BM6_I_9(1MZN)
RXRA_HUMAN
[Raw transfer]



BM6_E_5(1MVC)
RXRA_HUMAN
[Raw transfer]



4XW_A_3(4ZSH)
RXRA_HUMAN
[Raw transfer]



REA_K_11(1XDK)
RXRA_MOUSE
[Raw transfer]



BM6_J_10(1MZN)
RXRA_HUMAN
[Raw transfer]



21P_A_5(2ZY0)
RXRA_HUMAN
[Raw transfer]



BM6_K_11(1MZN)
RXRA_HUMAN
[Raw transfer]



BM6_L_12(1MZN)
RXRA_HUMAN
[Raw transfer]



4CU_A_3(5MKJ)
RXRA_HUMAN
[Raw transfer]



R4M_A_3(4M8H)
RXRA_HUMAN
[Raw transfer]



5LO_A_3(5EC9)
?
[Raw transfer]



1O8_A_3(4K4J)
?
[Raw transfer]



I5W_A_5(5MK4)
RXRA_HUMAN
[Raw transfer]



21P_C_6(2ZY0)
RXRA_HUMAN
[Raw transfer]



P26_A_3(2ZXZ)
RXRA_HUMAN
[Raw transfer]



3RB_A_3(4RFW)
RXRA_HUMAN
[Raw transfer]



REA_A_3(3OAP)
RXRA_HUMAN
[Raw transfer]



REA_D_4(1FBY)
RXRA_HUMAN
[Raw transfer]



L79_E_5(1RDT)
RXRA_HUMAN
[Raw transfer]



REA_I_9(1FM6)
RXRA_HUMAN
[Raw transfer]



REA_I_9(1XIU)
RXR_BIOGL
[Raw transfer]



2E3_A_3(3FUG)
RXRA_HUMAN
[Raw transfer]



REA_J_10(1FM6)
RXRA_HUMAN
[Raw transfer]



REA_C_3(1FBY)
RXRA_HUMAN
[Raw transfer]



I5W_C_7(5MK4)
?
[Raw transfer]



REA_E_5(1K74)
RXRA_HUMAN
[Raw transfer]



9RA_A_5(3H0A)

[Raw transfer]



REA_F_6(1FM9)
RXRA_HUMAN
[Raw transfer]



9CR_A_5(5JI0)
RXRA_HUMAN
[Raw transfer]



9CR_D_10(6A5Z)
?
[Raw transfer]



754_A_4(3A9E)
RXRA_MOUSE
[Raw transfer]



9CR_L_12(6A5Z)
?
[Raw transfer]



REA_A_11(3E00)
RXRA_HUMAN
[Raw transfer]



2QO_A_3(4OC7)
RXRA_HUMAN
[Raw transfer]



9CR_C_10(5Z12)
RXRA_HUMAN
[Raw transfer]



7O0_A_3(5MJ5)
RXRA_HUMAN
[Raw transfer]



REA_B_4(3UVV)
RXRA_HUMAN
[Raw transfer]



SJZ_A_3(5MMW)

[Raw transfer]



9CR_B_12(5Z12)
RXRA_HUMAN
[Raw transfer]



OLA_D_4(1DKF)
RXRA_MOUSE
[Raw transfer]



REA_K_11(1XIU)
RXR_BIOGL
[Raw transfer]



2VR_A_3(4POH)
RXRA_HUMAN
[Raw transfer]



9CR_D_7(6A5Y)
?
[Raw transfer]



F15_A_11(1XV9)
RXRA_HUMAN
[Raw transfer]



LG2_A_5(1H9U)
RXRB_HUMAN
[Raw transfer]



F15_C_9(1XVP)
RXRA_HUMAN
[Raw transfer]



LG2_C_11(1H9U)
RXRB_HUMAN
[Raw transfer]



REA_A_11(3DZU)
RXRA_HUMAN
[Raw transfer]



LG2_B_8(1H9U)
RXRB_HUMAN
[Raw transfer]



MEI_F_6(1UHL)

[Raw transfer]



LG2_D_13(1H9U)

[Raw transfer]



9CR_A_9(5UAN)
RXRA_HUMAN
[Raw transfer]



F15_C_10(1XV9)
RXRA_HUMAN
[Raw transfer]



REA_C_7(3FC6)
RXRA_HUMAN
[Raw transfer]



TBY_A_3(3E94)
RXRA_HUMAN
[Raw transfer]



F15_A_10(1XVP)
RXRA_HUMAN
[Raw transfer]



T9T_A_3(3KWY)
RXRA_HUMAN
[Raw transfer]



MLO_A_5(3R5M)
RXRA_HUMAN
[Raw transfer]



MLO_C_6(3R5M)
RXRA_HUMAN
[Raw transfer]



LX8_A_3(3PCU)
RXRA_HUMAN
[Raw transfer]



BGV_C_6(3OZJ)
RXRA_HUMAN
[Raw transfer]



9HF_C_15(5ZQU)
?
[Raw transfer]



REA_E_5(1G5Y)
RXRA_HUMAN
[Raw transfer]



REA_F_6(1G5Y)
RXRA_HUMAN
[Raw transfer]



BGV_A_5(3OZJ)
RXRA_HUMAN
[Raw transfer]



K09_A_5(4N5G)
RXRA_HUMAN
[Raw transfer]



K08_A_5(4N8R)
RXRA_HUMAN
[Raw transfer]



K08_D_6(4N8R)
?
[Raw transfer]



K09_D_6(4N5G)
?
[Raw transfer]



RHN_A_7(3R2A)
RXRA_HUMAN
[Raw transfer]



RHN_C_8(3R2A)
RXRA_HUMAN
[Raw transfer]



9HF_A_6(5ZQU)
?
[Raw transfer]



9HF_D_19(5ZQU)
?
[Raw transfer]



9HF_D_19(5ZQU)
?
[Raw transfer]



NEQ_U_4(4OZT)
?
[Raw transfer]
4 PsiBlast_PDB 79.21100%-139 - C1 -5UAN 7.2 RXRA_HUMAN
1 PsiBlast_PDB 77.49100%-127 - C1 -3DZU 7.2 RXRA_HUMAN
2 PsiBlast_PDB 76.81100%-126 - C1 -3E00 7.7 RXRA_HUMAN
16 PsiBlast_PDB 65.98100%-145 - C1 -2P1U 10.1 RXRA_HUMAN
58 Blastp_CBE 65.59100%-142 - C1 -3OZJ 2.7 RXRA_HUMAN
102 Blastp_CBE 65.14100%-141 - C1 -5MKJ 8.6 RXRA_HUMAN
24 Blastp_CBE 65.04100%-143 - C1 -3R5M 6.6 RXRA_HUMAN
103 Blastp_CBE 64.82100%-142 - C1 -3PCU 4.7 RXRA_HUMAN
19 PsiBlast_PDB 64.81100%-140 - C1 -2ZXZ 9.3 RXRA_HUMAN
55 Blastp_CBE 64.60100%-140 - C1 -6A5Z 9.0 ?
15 PsiBlast_PDB 64.57100%-140 - C1 -2P1T 9.7 RXRA_HUMAN
35 Blastp_CBE 64.42100%-130 - C1 -1MZN 9.9 RXRA_HUMAN
8 PsiBlast_PDB 64.35100%-141 - C1 -3KWY 7.5 RXRA_HUMAN
110 Blastp_CBE 64.0487%-144 - C1 -1UHL 5.8
100 Blastp_CBE 64.03100%-134 - C1 -4K4J 8.3 ?
14 PsiBlast_PDB 63.84100%-129 - C1 -1MZN 9.8 RXRA_HUMAN
107 Blastp_CBE 63.77100%-138 - C1 -5MJ5 9.6 RXRA_HUMAN
98 Blastp_CBE 63.75100%-135 - C1 -4M8E 8.4 RXRA_HUMAN
88 Blastp_CBE 63.6999%-138 - C1 -1DKF 7.4 RXRA_MOUSE
18 PsiBlast_PDB 63.64100%-138 - C1 -3FUG 9.7 RXRA_HUMAN
17 PsiBlast_PDB 63.59100%-136 - C1 -2P1V 10.3 RXRA_HUMAN
95 Blastp_CBE 63.57100%-134 - C1 -4POJ 8.9 RXRA_HUMAN
54 Blastp_CBE 63.50100%-136 - C1 -1RDT 9.8 RXRA_HUMAN
7 PsiBlast_PDB 63.48100%-138 - C1 -3E94 5.8 RXRA_HUMAN
92 Blastp_CBE 63.22100%-135 - C1 -4RFW 8.1 RXRA_HUMAN
13 PsiBlast_PDB 63.21100%-133 - C1 -1MVC 10.2 RXRA_HUMAN
6 PsiBlast_PDB 63.21100%-134 - C1 -4OC7 7.5 RXRA_HUMAN
96 Blastp_CBE 63.13100%-135 - C1 -4POH 8.2 RXRA_HUMAN
12 PsiBlast_PDB 63.05100%-130 - C1 -1MV9 8.8 RXRA_HUMAN
33 Blastp_CBE 62.89100%-130 - C1 -2ZY0 9.2 RXRA_HUMAN
75 Blastp_CBE 62.8799%-131 - C1 -1XDK 7.7 RXRA_MOUSE
59 Blastp_CBE 62.87100%-132 - C1 -3OZJ 4.1 RXRA_HUMAN
82 Blastp_CBE 62.83100%-130 - C1 -4RME 9.4 RXRA_HUMAN
22 Blastp_CBE 62.79100%-133 - C1 -5LYQ 10.6 RXRA_HUMAN
94 Blastp_CBE 62.78100%-130 - C1 -4PP3 8.8 RXRA_HUMAN
109 Blastp_CBE 62.7692%-140 * C1 *5EC9 10.2 ?
74 Blastp_CBE 62.6999%-132 - C1 -1XDK 7.6 RXRA_MOUSE
23 Blastp_CBE 62.66100%-130 - C1 -4ZSH 8.1 RXRA_HUMAN
57 Blastp_CBE 62.65100%-136 - C1 -6A5Y 8.7 ?
101 Blastp_CBE 62.63100%-129 - C1 -3OAP 7.7 RXRA_HUMAN
36 Blastp_CBE 62.53100%-133 - C1 -1MZN 9.8 RXRA_HUMAN
25 Blastp_CBE 62.50100%-131 - C1 -3R5M 7.2 RXRA_HUMAN
20 PsiBlast_PDB 62.50100%-129 - C1 -2ZY0 9.1 RXRA_HUMAN
70 Blastp_CBE 62.47100%-116 - C1 -1XVP 5.8 RXRA_HUMAN
99 Blastp_CBE 62.38100%-131 - C1 -4K6I 9.4 ?
104 Blastp_CBE 62.36100%-136 - C1 -5MMW 8.1
83 Blastp_CBE 62.34100%-129 - C1 -4RMD 9.9 RXRA_HUMAN
40 Blastp_CBE 62.33100%-161 - C1 -4N8R Error ?
56 Blastp_CBE 62.32100%-128 - C1 -6A5Z 8.6 ?
97 Blastp_CBE 62.04100%-132 - C1 -4M8H 8.2 RXRA_HUMAN
93 Blastp_CBE 61.99100%-129 - C1 -4PP5 8.9 RXRA_HUMAN
34 Blastp_CBE 61.89100%-129 - C1 -1MZN 9.8 RXRA_HUMAN
106 Blastp_CBE 61.76100%-131 - C1 -5MK4 9.2 RXRA_HUMAN
52 Blastp_CBE 61.36100%-130 - C1 -3UVV 7.9 RXRA_HUMAN
91 Blastp_CBE 61.26100%-126 - C1 -4RMC 8.2 RXRA_HUMAN
67 Blastp_CBE 61.12100%-113 - C1 -1FM9 8.7 RXRA_HUMAN
39 Blastp_CBE 61.03100%-160 - C1 -4N8R 8.0 ?
69 Blastp_CBE 60.99100%-118 - C1 -1FM6 8.1 RXRA_HUMAN
116 Blastp_CBE 60.9688%-157 - C1 -1H9U 9.8 RXRB_HUMAN
43 Blastp_CBE 60.78100%-144 - C1 -4N5G Error ?
105 Blastp_CBE 60.60100%-129 - C1 -5MK4 9.3 ?
64 Blastp_CBE 60.59100%-111 - C1 -1K74 7.8 RXRA_HUMAN
68 Blastp_CBE 60.38100%-116 - C1 -1FM6 8.5 RXRA_HUMAN
41 Blastp_CBE 60.25100%-156 - C1 -4N8R Error ?
89 Blastp_CBE 60.24100%-137 - C1 -5Z12 8.0 RXRA_HUMAN
114 Blastp_CBE 59.9488%-154 - C1 -1H9U 9.5 RXRB_HUMAN
65 Blastp_CBE 59.75100%-130 - C1 -1G5Y 6.3 RXRA_HUMAN
47 Blastp_CBE 59.6999%-157 - C1 -5ZQU 3.9 ?
9 PsiBlast_PDB 59.56100%-160 - C1 -4N5G 8.4 RXRA_HUMAN
115 Blastp_CBE 59.5388%-153 - C1 -1H9U 9.9 RXRB_HUMAN
90 Blastp_CBE 59.51100%-125 - C1 -5Z12 7.4 RXRA_HUMAN
72 Blastp_CBE 59.38100%-112 - C1 -1XV9 5.4 RXRA_HUMAN
113 Blastp_CBE 59.2788%-152 - C1 -1H9U 9.6
44 Blastp_CBE 59.1199%-156 - C1 -5ZQU 4.1 ?
42 Blastp_CBE 59.11100%-155 - C1 -4N5G 8.1 ?
50 Blastp_CBE 58.2699%-121 - C1 -5JI0 7.0 RXRA_HUMAN
73 Blastp_CBE 57.99100%-108 - C1 -1XV9 6.0 RXRA_HUMAN
45 Blastp_CBE 57.8099%-152 - C1 -5ZQU 7.8 ?
48 Blastp_CBE 57.71100%-122 - C1 -1FBY 8.1 RXRA_HUMAN
49 Blastp_CBE 57.56100%-119 - C1 -1FBY 8.0 RXRA_HUMAN
71 Blastp_CBE 56.81100%-105 - C1 -1XVP 5.4 RXRA_HUMAN
10 PsiBlast_PDB 56.66100%-150 - C1 -4N8R 8.2 RXRA_HUMAN
46 Blastp_CBE 56.6399%-147 - C1 -5ZQU 3.5 ?
66 Blastp_CBE 55.34100%-120 - C1 -1G5Y 6.6 RXRA_HUMAN
51 Blastp_CBE 53.9599%-113 - C1 -3A9E 9.2 RXRA_MOUSE
118 Blastp_CBE 53.8975%-155 - C1 -4OZT 2.9 ?
112 Blastp_CBE 53.7282%-127 - C1 -1XIU 8.2 RXR_BIOGL
27 Blastp_CBE 53.23100%-128 - C1 -3R2A 3.8 RXRA_HUMAN
53 Blastp_CBE 52.73100%-122 - C1 -3FC6 7.9 RXRA_HUMAN
111 Blastp_CBE 52.5982%-117 - C1 -1XIU 8.3 RXR_BIOGL
29 Blastp_CBE 52.45100%-116 - C1 -3R2A 3.7 RXRA_HUMAN
108 Blastp_CBE 51.31100%-113 - C1 -3H0A 8.2